Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PPP4R3CPQ6ZMV5 MTND2P25-201ENST00000449028 610 ntBASIC25.26■■□□□ 1.63
PPP4R3CPQ6ZMV5 NPM1P28-201ENST00000492269 840 ntBASIC25.26■■□□□ 1.63
PPP4R3CPQ6ZMV5 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
PPP4R3CPQ6ZMV5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.26■■□□□ 1.63
PPP4R3CPQ6ZMV5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PPP4R3CPQ6ZMV5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PPP4R3CPQ6ZMV5 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PPP4R3CPQ6ZMV5 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.25■■□□□ 1.63
PPP4R3CPQ6ZMV5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.25■■□□□ 1.63
PPP4R3CPQ6ZMV5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PPP4R3CPQ6ZMV5 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC25.25■■□□□ 1.63
PPP4R3CPQ6ZMV5 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC25.25■■□□□ 1.63
PPP4R3CPQ6ZMV5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.25■■□□□ 1.63
PPP4R3CPQ6ZMV5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
PPP4R3CPQ6ZMV5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.25■■□□□ 1.63
PPP4R3CPQ6ZMV5 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PPP4R3CPQ6ZMV5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PPP4R3CPQ6ZMV5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
PPP4R3CPQ6ZMV5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
PPP4R3CPQ6ZMV5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.24■■□□□ 1.63
PPP4R3CPQ6ZMV5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
PPP4R3CPQ6ZMV5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PPP4R3CPQ6ZMV5 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC25.24■■□□□ 1.63
PPP4R3CPQ6ZMV5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.24■■□□□ 1.63
PPP4R3CPQ6ZMV5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
PPP4R3CPQ6ZMV5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.24■■□□□ 1.63
PPP4R3CPQ6ZMV5 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PPP4R3CPQ6ZMV5 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PPP4R3CPQ6ZMV5 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
PPP4R3CPQ6ZMV5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PPP4R3CPQ6ZMV5 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PPP4R3CPQ6ZMV5 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PPP4R3CPQ6ZMV5 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
PPP4R3CPQ6ZMV5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.23■■□□□ 1.63
PPP4R3CPQ6ZMV5 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC25.23■■□□□ 1.63
PPP4R3CPQ6ZMV5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.23■■□□□ 1.63
PPP4R3CPQ6ZMV5 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC25.23■■□□□ 1.63
PPP4R3CPQ6ZMV5 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.23■■□□□ 1.63
PPP4R3CPQ6ZMV5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.23■■□□□ 1.63
PPP4R3CPQ6ZMV5 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC25.23■■□□□ 1.63
PPP4R3CPQ6ZMV5 AL356740.2-201ENST00000601559 647 ntBASIC25.23■■□□□ 1.63
PPP4R3CPQ6ZMV5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.23■■□□□ 1.63
PPP4R3CPQ6ZMV5 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.23■■□□□ 1.63
PPP4R3CPQ6ZMV5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PPP4R3CPQ6ZMV5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PPP4R3CPQ6ZMV5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
PPP4R3CPQ6ZMV5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PPP4R3CPQ6ZMV5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PPP4R3CPQ6ZMV5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.22■■□□□ 1.63
PPP4R3CPQ6ZMV5 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.22■■□□□ 1.63
PPP4R3CPQ6ZMV5 AC144521.1-201ENST00000607148 956 ntBASIC25.22■■□□□ 1.63
PPP4R3CPQ6ZMV5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PPP4R3CPQ6ZMV5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PPP4R3CPQ6ZMV5 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.22■■□□□ 1.63
PPP4R3CPQ6ZMV5 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PPP4R3CPQ6ZMV5 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.22■■□□□ 1.63
PPP4R3CPQ6ZMV5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PPP4R3CPQ6ZMV5 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.21■■□□□ 1.63
PPP4R3CPQ6ZMV5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PPP4R3CPQ6ZMV5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PPP4R3CPQ6ZMV5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.21■■□□□ 1.63
PPP4R3CPQ6ZMV5 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC25.21■■□□□ 1.63
PPP4R3CPQ6ZMV5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.21■■□□□ 1.63
PPP4R3CPQ6ZMV5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PPP4R3CPQ6ZMV5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
PPP4R3CPQ6ZMV5 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
PPP4R3CPQ6ZMV5 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PPP4R3CPQ6ZMV5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.2■■□□□ 1.62
PPP4R3CPQ6ZMV5 AC131281.2-201ENST00000520478 145 ntBASIC25.2■■□□□ 1.62
PPP4R3CPQ6ZMV5 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC25.2■■□□□ 1.62
PPP4R3CPQ6ZMV5 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.2■■□□□ 1.62
PPP4R3CPQ6ZMV5 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PPP4R3CPQ6ZMV5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PPP4R3CPQ6ZMV5 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
PPP4R3CPQ6ZMV5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PPP4R3CPQ6ZMV5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PPP4R3CPQ6ZMV5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
PPP4R3CPQ6ZMV5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PPP4R3CPQ6ZMV5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PPP4R3CPQ6ZMV5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PPP4R3CPQ6ZMV5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.19■■□□□ 1.62
PPP4R3CPQ6ZMV5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.19■■□□□ 1.62
PPP4R3CPQ6ZMV5 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC25.19■■□□□ 1.62
PPP4R3CPQ6ZMV5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.19■■□□□ 1.62
PPP4R3CPQ6ZMV5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC25.19■■□□□ 1.62
PPP4R3CPQ6ZMV5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
PPP4R3CPQ6ZMV5 AC008406.3-201ENST00000620001 1374 ntBASIC25.18■■□□□ 1.62
PPP4R3CPQ6ZMV5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.18■■□□□ 1.62
PPP4R3CPQ6ZMV5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
PPP4R3CPQ6ZMV5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
PPP4R3CPQ6ZMV5 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PPP4R3CPQ6ZMV5 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.18■■□□□ 1.62
PPP4R3CPQ6ZMV5 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC25.18■■□□□ 1.62
PPP4R3CPQ6ZMV5 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC25.18■■□□□ 1.62
PPP4R3CPQ6ZMV5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.17■■□□□ 1.62
PPP4R3CPQ6ZMV5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PPP4R3CPQ6ZMV5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.17■■□□□ 1.62
PPP4R3CPQ6ZMV5 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC25.17■■□□□ 1.62
PPP4R3CPQ6ZMV5 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC25.17■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms