Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 NT5C3AP1-201ENST00000394500 1012 ntBASIC15.31■□□□□ 0.04
VPS13DQ5THJ4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS13DQ5THJ4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS13DQ5THJ4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.31■□□□□ 0.04
VPS13DQ5THJ4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS13DQ5THJ4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.31■□□□□ 0.04
VPS13DQ5THJ4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
VPS13DQ5THJ4 AP005435.1-201ENST00000529293 1178 ntBASIC15.31■□□□□ 0.04
VPS13DQ5THJ4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC15.31■□□□□ 0.04
VPS13DQ5THJ4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS13DQ5THJ4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
VPS13DQ5THJ4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
VPS13DQ5THJ4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS13DQ5THJ4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS13DQ5THJ4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
VPS13DQ5THJ4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
VPS13DQ5THJ4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.3■□□□□ 0.04
VPS13DQ5THJ4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VPS13DQ5THJ4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.3■□□□□ 0.04
VPS13DQ5THJ4 AC141586.4-201ENST00000624558 1573 ntBASIC15.3■□□□□ 0.04
VPS13DQ5THJ4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VPS13DQ5THJ4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
VPS13DQ5THJ4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.3■□□□□ 0.04
VPS13DQ5THJ4 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.3■□□□□ 0.04
VPS13DQ5THJ4 AC009086.3-201ENST00000623486 1008 ntBASIC15.3■□□□□ 0.04
VPS13DQ5THJ4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
VPS13DQ5THJ4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC15.3■□□□□ 0.04
VPS13DQ5THJ4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC15.3■□□□□ 0.04
VPS13DQ5THJ4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC15.3■□□□□ 0.04
VPS13DQ5THJ4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VPS13DQ5THJ4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
VPS13DQ5THJ4 AC092171.4-201ENST00000609130 632 ntBASIC15.29■□□□□ 0.04
VPS13DQ5THJ4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC15.29■□□□□ 0.04
VPS13DQ5THJ4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
VPS13DQ5THJ4 AC126544.1-201ENST00000580842 1059 ntBASIC15.29■□□□□ 0.04
VPS13DQ5THJ4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VPS13DQ5THJ4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS13DQ5THJ4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
VPS13DQ5THJ4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS13DQ5THJ4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS13DQ5THJ4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VPS13DQ5THJ4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VPS13DQ5THJ4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS13DQ5THJ4 CROCCP5-201ENST00000436658 830 ntBASIC15.29■□□□□ 0.04
VPS13DQ5THJ4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VPS13DQ5THJ4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS13DQ5THJ4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS13DQ5THJ4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS13DQ5THJ4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS13DQ5THJ4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS13DQ5THJ4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS13DQ5THJ4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.28■□□□□ 0.04
VPS13DQ5THJ4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS13DQ5THJ4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS13DQ5THJ4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.28■□□□□ 0.04
VPS13DQ5THJ4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.28■□□□□ 0.04
VPS13DQ5THJ4 GUSBP6-202ENST00000438529 1198 ntBASIC15.28■□□□□ 0.04
VPS13DQ5THJ4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS13DQ5THJ4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
VPS13DQ5THJ4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VPS13DQ5THJ4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.27■□□□□ 0.04
VPS13DQ5THJ4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC15.27■□□□□ 0.04
VPS13DQ5THJ4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
VPS13DQ5THJ4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VPS13DQ5THJ4 AC010525.1-201ENST00000585559 441 ntBASIC15.27■□□□□ 0.04
VPS13DQ5THJ4 AL499627.2-201ENST00000606283 725 ntBASIC15.27■□□□□ 0.04
VPS13DQ5THJ4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
VPS13DQ5THJ4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VPS13DQ5THJ4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.27■□□□□ 0.03
VPS13DQ5THJ4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.27■□□□□ 0.03
VPS13DQ5THJ4 AC135731.1-201ENST00000569415 2548 ntBASIC15.27■□□□□ 0.03
VPS13DQ5THJ4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.27■□□□□ 0.03
VPS13DQ5THJ4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
VPS13DQ5THJ4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC15.27■□□□□ 0.03
VPS13DQ5THJ4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
VPS13DQ5THJ4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.27■□□□□ 0.03
VPS13DQ5THJ4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
VPS13DQ5THJ4 NTF6G-201ENST00000591094 616 ntBASIC15.27■□□□□ 0.03
VPS13DQ5THJ4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VPS13DQ5THJ4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VPS13DQ5THJ4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC15.26■□□□□ 0.03
VPS13DQ5THJ4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC15.26■□□□□ 0.03
VPS13DQ5THJ4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC15.26■□□□□ 0.03
VPS13DQ5THJ4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VPS13DQ5THJ4 NME4-202ENST00000382940 766 ntTSL 3 BASIC15.26■□□□□ 0.03
VPS13DQ5THJ4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VPS13DQ5THJ4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15.26■□□□□ 0.03
VPS13DQ5THJ4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
VPS13DQ5THJ4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VPS13DQ5THJ4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VPS13DQ5THJ4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.26■□□□□ 0.03
VPS13DQ5THJ4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VPS13DQ5THJ4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
VPS13DQ5THJ4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VPS13DQ5THJ4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC15.25■□□□□ 0.03
VPS13DQ5THJ4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.25■□□□□ 0.03
VPS13DQ5THJ4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
VPS13DQ5THJ4 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.25■□□□□ 0.03
VPS13DQ5THJ4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
VPS13DQ5THJ4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms