Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.79■□□□□ 0.76
FREM1Q5H8C1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FREM1Q5H8C1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.79■□□□□ 0.76
FREM1Q5H8C1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FREM1Q5H8C1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.79■□□□□ 0.76
FREM1Q5H8C1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FREM1Q5H8C1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FREM1Q5H8C1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.78■□□□□ 0.76
FREM1Q5H8C1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.78■□□□□ 0.76
FREM1Q5H8C1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.78■□□□□ 0.76
FREM1Q5H8C1 FP325331.1-202ENST00000623531 1380 ntBASIC19.78■□□□□ 0.76
FREM1Q5H8C1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.78■□□□□ 0.76
FREM1Q5H8C1 PBX2P1-201ENST00000493219 1291 ntBASIC19.78■□□□□ 0.76
FREM1Q5H8C1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.78■□□□□ 0.76
FREM1Q5H8C1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.78■□□□□ 0.76
FREM1Q5H8C1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
FREM1Q5H8C1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FREM1Q5H8C1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FREM1Q5H8C1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FREM1Q5H8C1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.77■□□□□ 0.76
FREM1Q5H8C1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.77■□□□□ 0.76
FREM1Q5H8C1 SRD5A1P1-201ENST00000442297 786 ntBASIC19.77■□□□□ 0.76
FREM1Q5H8C1 AF213884.3-201ENST00000563833 479 ntBASIC19.77■□□□□ 0.76
FREM1Q5H8C1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.77■□□□□ 0.76
FREM1Q5H8C1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
FREM1Q5H8C1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
FREM1Q5H8C1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.77■□□□□ 0.76
FREM1Q5H8C1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FREM1Q5H8C1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
FREM1Q5H8C1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
FREM1Q5H8C1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
FREM1Q5H8C1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.75
FREM1Q5H8C1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
FREM1Q5H8C1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
FREM1Q5H8C1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
FREM1Q5H8C1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
FREM1Q5H8C1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FREM1Q5H8C1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FREM1Q5H8C1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.76■□□□□ 0.75
FREM1Q5H8C1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FREM1Q5H8C1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.76■□□□□ 0.75
FREM1Q5H8C1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.76■□□□□ 0.75
FREM1Q5H8C1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.76■□□□□ 0.75
FREM1Q5H8C1 EDA-201ENST00000338901 1233 ntBASIC19.75■□□□□ 0.75
FREM1Q5H8C1 ZNRF2P3-201ENST00000424200 374 ntBASIC19.75■□□□□ 0.75
FREM1Q5H8C1 AP001330.3-201ENST00000520123 633 ntBASIC19.75■□□□□ 0.75
FREM1Q5H8C1 AC005837.3-201ENST00000612163 286 ntBASIC19.75■□□□□ 0.75
FREM1Q5H8C1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
FREM1Q5H8C1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FREM1Q5H8C1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FREM1Q5H8C1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.75■□□□□ 0.75
FREM1Q5H8C1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
FREM1Q5H8C1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.74■□□□□ 0.75
FREM1Q5H8C1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FREM1Q5H8C1 AL138724.1-201ENST00000606771 1088 ntBASIC19.74■□□□□ 0.75
FREM1Q5H8C1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.74■□□□□ 0.75
FREM1Q5H8C1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
FREM1Q5H8C1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
FREM1Q5H8C1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.74■□□□□ 0.75
FREM1Q5H8C1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
FREM1Q5H8C1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FREM1Q5H8C1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FREM1Q5H8C1 SLC47A1P1-202ENST00000449666 945 ntBASIC19.73■□□□□ 0.75
FREM1Q5H8C1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.73■□□□□ 0.75
FREM1Q5H8C1 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.73■□□□□ 0.75
FREM1Q5H8C1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FREM1Q5H8C1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FREM1Q5H8C1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.73■□□□□ 0.75
FREM1Q5H8C1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FREM1Q5H8C1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.73■□□□□ 0.75
FREM1Q5H8C1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FREM1Q5H8C1 AL136162.1-201ENST00000607711 1078 ntBASIC19.73■□□□□ 0.75
FREM1Q5H8C1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FREM1Q5H8C1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
FREM1Q5H8C1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
FREM1Q5H8C1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
FREM1Q5H8C1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FREM1Q5H8C1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
FREM1Q5H8C1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FREM1Q5H8C1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
FREM1Q5H8C1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.72■□□□□ 0.75
FREM1Q5H8C1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.72■□□□□ 0.75
FREM1Q5H8C1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FREM1Q5H8C1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
FREM1Q5H8C1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FREM1Q5H8C1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.71■□□□□ 0.75
FREM1Q5H8C1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FREM1Q5H8C1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FREM1Q5H8C1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.71■□□□□ 0.75
FREM1Q5H8C1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FREM1Q5H8C1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FREM1Q5H8C1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
FREM1Q5H8C1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FREM1Q5H8C1 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.71■□□□□ 0.75
FREM1Q5H8C1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.71■□□□□ 0.75
FREM1Q5H8C1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FREM1Q5H8C1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
FREM1Q5H8C1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FREM1Q5H8C1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
FREM1Q5H8C1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms