Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.65■■□□□ 1.38
PTPN20Q4JDL3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTPN20Q4JDL3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PTPN20Q4JDL3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
PTPN20Q4JDL3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.65■■□□□ 1.38
PTPN20Q4JDL3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.65■■□□□ 1.38
PTPN20Q4JDL3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PTPN20Q4JDL3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.65■■□□□ 1.38
PTPN20Q4JDL3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.65■■□□□ 1.38
PTPN20Q4JDL3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PTPN20Q4JDL3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.64■■□□□ 1.38
PTPN20Q4JDL3 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.64■■□□□ 1.37
PTPN20Q4JDL3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
PTPN20Q4JDL3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.64■■□□□ 1.37
PTPN20Q4JDL3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PTPN20Q4JDL3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PTPN20Q4JDL3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
PTPN20Q4JDL3 C17orf82-201ENST00000623772 1530 ntBASIC23.64■■□□□ 1.37
PTPN20Q4JDL3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTPN20Q4JDL3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PTPN20Q4JDL3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.63■■□□□ 1.37
PTPN20Q4JDL3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PTPN20Q4JDL3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTPN20Q4JDL3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
PTPN20Q4JDL3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTPN20Q4JDL3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PTPN20Q4JDL3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.63■■□□□ 1.37
PTPN20Q4JDL3 AL356740.2-201ENST00000601559 647 ntBASIC23.62■■□□□ 1.37
PTPN20Q4JDL3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PTPN20Q4JDL3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PTPN20Q4JDL3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PTPN20Q4JDL3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PTPN20Q4JDL3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PTPN20Q4JDL3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.61■■□□□ 1.37
PTPN20Q4JDL3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PTPN20Q4JDL3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PTPN20Q4JDL3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PTPN20Q4JDL3 AC068473.5-201ENST00000616428 2072 ntBASIC23.61■■□□□ 1.37
PTPN20Q4JDL3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.61■■□□□ 1.37
PTPN20Q4JDL3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PTPN20Q4JDL3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PTPN20Q4JDL3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.6■■□□□ 1.37
PTPN20Q4JDL3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTPN20Q4JDL3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTPN20Q4JDL3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTPN20Q4JDL3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.6■■□□□ 1.37
PTPN20Q4JDL3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTPN20Q4JDL3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.6■■□□□ 1.37
PTPN20Q4JDL3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.6■■□□□ 1.37
PTPN20Q4JDL3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTPN20Q4JDL3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
PTPN20Q4JDL3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTPN20Q4JDL3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.59■■□□□ 1.37
PTPN20Q4JDL3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.59■■□□□ 1.37
PTPN20Q4JDL3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PTPN20Q4JDL3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.59■■□□□ 1.37
PTPN20Q4JDL3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
PTPN20Q4JDL3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PTPN20Q4JDL3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
PTPN20Q4JDL3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PTPN20Q4JDL3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.58■■□□□ 1.37
PTPN20Q4JDL3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.58■■□□□ 1.37
PTPN20Q4JDL3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.58■■□□□ 1.37
PTPN20Q4JDL3 AL512631.2-201ENST00000604634 923 ntBASIC23.58■■□□□ 1.37
PTPN20Q4JDL3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.58■■□□□ 1.37
PTPN20Q4JDL3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.58■■□□□ 1.37
PTPN20Q4JDL3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
PTPN20Q4JDL3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
PTPN20Q4JDL3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
PTPN20Q4JDL3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
PTPN20Q4JDL3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.58■■□□□ 1.36
PTPN20Q4JDL3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.57■■□□□ 1.36
PTPN20Q4JDL3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PTPN20Q4JDL3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PTPN20Q4JDL3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PTPN20Q4JDL3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.57■■□□□ 1.36
PTPN20Q4JDL3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PTPN20Q4JDL3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PTPN20Q4JDL3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PTPN20Q4JDL3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.57■■□□□ 1.36
PTPN20Q4JDL3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.57■■□□□ 1.36
PTPN20Q4JDL3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTPN20Q4JDL3 LINC01529-204ENST00000636474 1715 ntBASIC23.56■■□□□ 1.36
PTPN20Q4JDL3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
PTPN20Q4JDL3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
PTPN20Q4JDL3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.56■■□□□ 1.36
PTPN20Q4JDL3 FP325331.1-202ENST00000623531 1380 ntBASIC23.56■■□□□ 1.36
PTPN20Q4JDL3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTPN20Q4JDL3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTPN20Q4JDL3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTPN20Q4JDL3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.56■■□□□ 1.36
PTPN20Q4JDL3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.56■■□□□ 1.36
PTPN20Q4JDL3 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.56■■□□□ 1.36
PTPN20Q4JDL3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.56■■□□□ 1.36
PTPN20Q4JDL3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.56■■□□□ 1.36
PTPN20Q4JDL3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PTPN20Q4JDL3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.56■■□□□ 1.36
PTPN20Q4JDL3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PTPN20Q4JDL3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
PTPN20Q4JDL3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms