Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.82■□□□□ 0.76
HIST3H3Q16695 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HIST3H3Q16695 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HIST3H3Q16695 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
HIST3H3Q16695 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.82■□□□□ 0.76
HIST3H3Q16695 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HIST3H3Q16695 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.82■□□□□ 0.76
HIST3H3Q16695 AC012676.1-201ENST00000574705 1949 ntBASIC19.82■□□□□ 0.76
HIST3H3Q16695 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HIST3H3Q16695 C9orf163-202ENST00000624034 2573 ntBASIC19.82■□□□□ 0.76
HIST3H3Q16695 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIST3H3Q16695 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.81■□□□□ 0.76
HIST3H3Q16695 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIST3H3Q16695 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.81■□□□□ 0.76
HIST3H3Q16695 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIST3H3Q16695 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIST3H3Q16695 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIST3H3Q16695 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.81■□□□□ 0.76
HIST3H3Q16695 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HIST3H3Q16695 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HIST3H3Q16695 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.81■□□□□ 0.76
HIST3H3Q16695 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.81■□□□□ 0.76
HIST3H3Q16695 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.81■□□□□ 0.76
HIST3H3Q16695 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HIST3H3Q16695 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.8■□□□□ 0.76
HIST3H3Q16695 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.8■□□□□ 0.76
HIST3H3Q16695 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.8■□□□□ 0.76
HIST3H3Q16695 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIST3H3Q16695 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HIST3H3Q16695 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.8■□□□□ 0.76
HIST3H3Q16695 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
HIST3H3Q16695 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
HIST3H3Q16695 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST3H3Q16695 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HIST3H3Q16695 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.79■□□□□ 0.76
HIST3H3Q16695 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.79■□□□□ 0.76
HIST3H3Q16695 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.79■□□□□ 0.76
HIST3H3Q16695 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.79■□□□□ 0.76
HIST3H3Q16695 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HIST3H3Q16695 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HIST3H3Q16695 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.79■□□□□ 0.76
HIST3H3Q16695 LINC01529-204ENST00000636474 1715 ntBASIC19.79■□□□□ 0.76
HIST3H3Q16695 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIST3H3Q16695 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.78■□□□□ 0.76
HIST3H3Q16695 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HIST3H3Q16695 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIST3H3Q16695 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
HIST3H3Q16695 C17orf82-201ENST00000623772 1530 ntBASIC19.78■□□□□ 0.76
HIST3H3Q16695 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HIST3H3Q16695 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.78■□□□□ 0.76
HIST3H3Q16695 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIST3H3Q16695 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
HIST3H3Q16695 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.78■□□□□ 0.76
HIST3H3Q16695 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
HIST3H3Q16695 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.77■□□□□ 0.76
HIST3H3Q16695 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIST3H3Q16695 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.77■□□□□ 0.76
HIST3H3Q16695 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HIST3H3Q16695 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
HIST3H3Q16695 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
HIST3H3Q16695 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HIST3H3Q16695 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
HIST3H3Q16695 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
HIST3H3Q16695 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST3H3Q16695 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST3H3Q16695 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HIST3H3Q16695 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST3H3Q16695 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.76■□□□□ 0.75
HIST3H3Q16695 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
HIST3H3Q16695 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.76■□□□□ 0.75
HIST3H3Q16695 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HIST3H3Q16695 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HIST3H3Q16695 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST3H3Q16695 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HIST3H3Q16695 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HIST3H3Q16695 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST3H3Q16695 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST3H3Q16695 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.76■□□□□ 0.75
HIST3H3Q16695 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.76■□□□□ 0.75
HIST3H3Q16695 DUX4L4-201ENST00000566884 1269 ntBASIC19.76■□□□□ 0.75
HIST3H3Q16695 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST3H3Q16695 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.76■□□□□ 0.75
HIST3H3Q16695 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.76■□□□□ 0.75
HIST3H3Q16695 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.76■□□□□ 0.75
HIST3H3Q16695 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIST3H3Q16695 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HIST3H3Q16695 AC133561.1-201ENST00000568600 2415 ntBASIC19.75■□□□□ 0.75
HIST3H3Q16695 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
HIST3H3Q16695 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HIST3H3Q16695 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.75■□□□□ 0.75
HIST3H3Q16695 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIST3H3Q16695 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIST3H3Q16695 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HIST3H3Q16695 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.75■□□□□ 0.75
HIST3H3Q16695 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.75■□□□□ 0.75
HIST3H3Q16695 MIR3621-201ENST00000580529 85 ntBASIC19.75■□□□□ 0.75
HIST3H3Q16695 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.75■□□□□ 0.75
HIST3H3Q16695 AL117332.1-201ENST00000622628 974 ntBASIC19.75■□□□□ 0.75
HIST3H3Q16695 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.75■□□□□ 0.75
HIST3H3Q16695 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms