Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.57■■□□□ 1.04
HMGCS1Q01581 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCS1Q01581 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCS1Q01581 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCS1Q01581 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCS1Q01581 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.57■■□□□ 1.04
HMGCS1Q01581 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.57■■□□□ 1.04
HMGCS1Q01581 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCS1Q01581 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.57■■□□□ 1.04
HMGCS1Q01581 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.57■■□□□ 1.04
HMGCS1Q01581 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGCS1Q01581 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGCS1Q01581 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.56■■□□□ 1.04
HMGCS1Q01581 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.56■■□□□ 1.04
HMGCS1Q01581 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGCS1Q01581 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
HMGCS1Q01581 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
HMGCS1Q01581 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
HMGCS1Q01581 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HMGCS1Q01581 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGCS1Q01581 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.56■■□□□ 1.04
HMGCS1Q01581 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGCS1Q01581 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCS1Q01581 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
HMGCS1Q01581 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCS1Q01581 AL353803.4-201ENST00000565882 1934 ntBASIC21.55■■□□□ 1.04
HMGCS1Q01581 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.55■■□□□ 1.04
HMGCS1Q01581 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCS1Q01581 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCS1Q01581 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
HMGCS1Q01581 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.55■■□□□ 1.04
HMGCS1Q01581 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.55■■□□□ 1.04
HMGCS1Q01581 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.55■■□□□ 1.04
HMGCS1Q01581 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
HMGCS1Q01581 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
HMGCS1Q01581 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.54■■□□□ 1.04
HMGCS1Q01581 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCS1Q01581 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCS1Q01581 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCS1Q01581 AC021242.3-201ENST00000607598 1377 ntBASIC21.54■■□□□ 1.04
HMGCS1Q01581 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
HMGCS1Q01581 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.54■■□□□ 1.04
HMGCS1Q01581 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.54■■□□□ 1.04
HMGCS1Q01581 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.54■■□□□ 1.04
HMGCS1Q01581 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.54■■□□□ 1.04
HMGCS1Q01581 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
HMGCS1Q01581 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCS1Q01581 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCS1Q01581 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HMGCS1Q01581 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HMGCS1Q01581 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
HMGCS1Q01581 EP400NL-214ENST00000641289 2402 ntBASIC21.53■■□□□ 1.04
HMGCS1Q01581 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCS1Q01581 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.04
HMGCS1Q01581 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCS1Q01581 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCS1Q01581 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCS1Q01581 BX664725.1-201ENST00000438252 379 ntBASIC21.52■■□□□ 1.04
HMGCS1Q01581 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
HMGCS1Q01581 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.52■■□□□ 1.04
HMGCS1Q01581 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.52■■□□□ 1.04
HMGCS1Q01581 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
HMGCS1Q01581 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
HMGCS1Q01581 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.51■■□□□ 1.03
HMGCS1Q01581 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMGCS1Q01581 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMGCS1Q01581 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HMGCS1Q01581 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMGCS1Q01581 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMGCS1Q01581 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
HMGCS1Q01581 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
HMGCS1Q01581 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.5■■□□□ 1.03
HMGCS1Q01581 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMGCS1Q01581 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
HMGCS1Q01581 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMGCS1Q01581 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HMGCS1Q01581 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.49■■□□□ 1.03
HMGCS1Q01581 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMGCS1Q01581 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMGCS1Q01581 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
HMGCS1Q01581 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMGCS1Q01581 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.49■■□□□ 1.03
HMGCS1Q01581 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
HMGCS1Q01581 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HMGCS1Q01581 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMGCS1Q01581 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMGCS1Q01581 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
HMGCS1Q01581 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCS1Q01581 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCS1Q01581 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCS1Q01581 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
HMGCS1Q01581 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCS1Q01581 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCS1Q01581 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCS1Q01581 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCS1Q01581 MIR6722-201ENST00000617286 78 ntBASIC21.48■■□□□ 1.03
HMGCS1Q01581 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.48■■□□□ 1.03
HMGCS1Q01581 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
HMGCS1Q01581 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.48■■□□□ 1.03
HMGCS1Q01581 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms