Protein–RNA interactions for Protein: P78346

RPP30, Ribonuclease P protein subunit p30, humanhuman

Known RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP30P78346 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RPP30P78346 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RPP30P78346 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RPP30P78346 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RPP30P78346 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RPP30P78346 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RPP30P78346 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
RPP30P78346 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPP30P78346 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RPP30P78346 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPP30P78346 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPP30P78346 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
RPP30P78346 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
RPP30P78346 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPP30P78346 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RPP30P78346 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPP30P78346 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.07■□□□□ 0.48
RPP30P78346 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPP30P78346 AL024507.2-201ENST00000606070 2574 ntBASIC18.07■□□□□ 0.48
RPP30P78346 ALDH1A3-203ENST00000557963 1670 ntBASIC18.07■□□□□ 0.48
RPP30P78346 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPP30P78346 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.07■□□□□ 0.48
RPP30P78346 AC087393.1-201ENST00000582896 145 ntBASIC18.07■□□□□ 0.48
RPP30P78346 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.07■□□□□ 0.48
RPP30P78346 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPP30P78346 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.07■□□□□ 0.48
RPP30P78346 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPP30P78346 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPP30P78346 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.07■□□□□ 0.48
RPP30P78346 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.07■□□□□ 0.48
RPP30P78346 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RPP30P78346 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPP30P78346 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.07■□□□□ 0.48
RPP30P78346 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPP30P78346 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPP30P78346 LINC00565-201ENST00000562710 2331 ntBASIC18.06■□□□□ 0.48
RPP30P78346 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPP30P78346 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPP30P78346 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPP30P78346 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPP30P78346 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RPP30P78346 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPP30P78346 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RPP30P78346 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPP30P78346 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.06■□□□□ 0.48
RPP30P78346 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPP30P78346 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPP30P78346 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPP30P78346 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPP30P78346 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPP30P78346 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPP30P78346 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RPP30P78346 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RPP30P78346 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RPP30P78346 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPP30P78346 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.05■□□□□ 0.48
RPP30P78346 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.05■□□□□ 0.48
RPP30P78346 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPP30P78346 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RPP30P78346 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPP30P78346 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPP30P78346 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPP30P78346 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPP30P78346 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPP30P78346 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPP30P78346 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RPP30P78346 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RPP30P78346 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RPP30P78346 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RPP30P78346 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RPP30P78346 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RPP30P78346 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RPP30P78346 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPP30P78346 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RPP30P78346 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPP30P78346 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.04■□□□□ 0.48
RPP30P78346 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPP30P78346 AC137767.1-201ENST00000602918 1920 ntBASIC18.04■□□□□ 0.48
RPP30P78346 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RPP30P78346 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPP30P78346 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPP30P78346 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPP30P78346 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPP30P78346 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.03■□□□□ 0.48
RPP30P78346 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.03■□□□□ 0.48
RPP30P78346 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.03■□□□□ 0.48
RPP30P78346 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RPP30P78346 AC011551.1-201ENST00000614101 683 ntBASIC18.03■□□□□ 0.48
RPP30P78346 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.03■□□□□ 0.48
RPP30P78346 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.03■□□□□ 0.48
RPP30P78346 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPP30P78346 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RPP30P78346 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPP30P78346 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPP30P78346 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.03■□□□□ 0.48
RPP30P78346 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.03■□□□□ 0.48
RPP30P78346 AC242852.2-201ENST00000615738 1807 ntBASIC18.02■□□□□ 0.48
RPP30P78346 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPP30P78346 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPP30P78346 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms