Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.54■□□□□ 0.56
SUPT4H1P63272 RPS2P7-201ENST00000447334 885 ntBASIC18.54■□□□□ 0.56
SUPT4H1P63272 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.54■□□□□ 0.56
SUPT4H1P63272 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SUPT4H1P63272 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.54■□□□□ 0.56
SUPT4H1P63272 AC131274.2-201ENST00000580697 1507 ntBASIC18.54■□□□□ 0.56
SUPT4H1P63272 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUPT4H1P63272 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUPT4H1P63272 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUPT4H1P63272 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
SUPT4H1P63272 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SUPT4H1P63272 AC080038.3-201ENST00000623346 1952 ntBASIC18.52■□□□□ 0.56
SUPT4H1P63272 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SUPT4H1P63272 AL592295.1-201ENST00000400984 884 ntBASIC18.52■□□□□ 0.56
SUPT4H1P63272 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.52■□□□□ 0.56
SUPT4H1P63272 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SUPT4H1P63272 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SUPT4H1P63272 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.51■□□□□ 0.55
SUPT4H1P63272 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SUPT4H1P63272 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT4H1P63272 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.51■□□□□ 0.55
SUPT4H1P63272 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT4H1P63272 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT4H1P63272 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT4H1P63272 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT4H1P63272 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT4H1P63272 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT4H1P63272 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT4H1P63272 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT4H1P63272 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SUPT4H1P63272 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT4H1P63272 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SUPT4H1P63272 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT4H1P63272 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT4H1P63272 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SUPT4H1P63272 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.5■□□□□ 0.55
SUPT4H1P63272 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SUPT4H1P63272 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.5■□□□□ 0.55
SUPT4H1P63272 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SUPT4H1P63272 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SUPT4H1P63272 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SUPT4H1P63272 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SUPT4H1P63272 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SUPT4H1P63272 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.49■□□□□ 0.55
SUPT4H1P63272 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SUPT4H1P63272 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SUPT4H1P63272 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SUPT4H1P63272 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SUPT4H1P63272 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.49■□□□□ 0.55
SUPT4H1P63272 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SUPT4H1P63272 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SUPT4H1P63272 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUPT4H1P63272 SLC25A24-204ENST00000569674 2357 ntBASIC18.48■□□□□ 0.55
SUPT4H1P63272 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SUPT4H1P63272 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.48■□□□□ 0.55
SUPT4H1P63272 AC026310.3-201ENST00000625186 2373 ntBASIC18.48■□□□□ 0.55
SUPT4H1P63272 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUPT4H1P63272 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUPT4H1P63272 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SUPT4H1P63272 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT4H1P63272 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT4H1P63272 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT4H1P63272 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
SUPT4H1P63272 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.47■□□□□ 0.55
SUPT4H1P63272 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT4H1P63272 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT4H1P63272 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT4H1P63272 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT4H1P63272 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT4H1P63272 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT4H1P63272 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT4H1P63272 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.47■□□□□ 0.55
SUPT4H1P63272 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUPT4H1P63272 AC009831.1-201ENST00000580420 1582 ntBASIC18.47■□□□□ 0.55
SUPT4H1P63272 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SUPT4H1P63272 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SUPT4H1P63272 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SUPT4H1P63272 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SUPT4H1P63272 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.46■□□□□ 0.55
SUPT4H1P63272 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.46■□□□□ 0.55
SUPT4H1P63272 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SUPT4H1P63272 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.46■□□□□ 0.55
SUPT4H1P63272 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SUPT4H1P63272 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SUPT4H1P63272 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
SUPT4H1P63272 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
SUPT4H1P63272 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.45■□□□□ 0.54
SUPT4H1P63272 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.45■□□□□ 0.54
SUPT4H1P63272 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SUPT4H1P63272 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
SUPT4H1P63272 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SUPT4H1P63272 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.45■□□□□ 0.54
SUPT4H1P63272 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SUPT4H1P63272 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.45■□□□□ 0.54
SUPT4H1P63272 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SUPT4H1P63272 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
SUPT4H1P63272 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.45■□□□□ 0.54
SUPT4H1P63272 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SUPT4H1P63272 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SUPT4H1P63272 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms