Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB5BP61020 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB5BP61020 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
RAB5BP61020 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB5BP61020 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB5BP61020 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB5BP61020 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.59■□□□□ 0.41
RAB5BP61020 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB5BP61020 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB5BP61020 ZNRF2P1-201ENST00000441407 443 ntBASIC17.59■□□□□ 0.41
RAB5BP61020 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RAB5BP61020 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB5BP61020 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAB5BP61020 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB5BP61020 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB5BP61020 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAB5BP61020 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAB5BP61020 C11orf96-202ENST00000528572 1834 ntBASIC17.58■□□□□ 0.41
RAB5BP61020 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.58■□□□□ 0.41
RAB5BP61020 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB5BP61020 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAB5BP61020 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAB5BP61020 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB5BP61020 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB5BP61020 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB5BP61020 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB5BP61020 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
RAB5BP61020 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB5BP61020 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RAB5BP61020 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RAB5BP61020 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB5BP61020 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB5BP61020 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RAB5BP61020 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RAB5BP61020 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
RAB5BP61020 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RAB5BP61020 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB5BP61020 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB5BP61020 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB5BP61020 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB5BP61020 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RAB5BP61020 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RAB5BP61020 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB5BP61020 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB5BP61020 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB5BP61020 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB5BP61020 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB5BP61020 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB5BP61020 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB5BP61020 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB5BP61020 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RAB5BP61020 AL133380.1-201ENST00000506013 324 ntBASIC17.55■□□□□ 0.4
RAB5BP61020 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB5BP61020 ANOS2P-203ENST00000472227 1816 ntBASIC17.55■□□□□ 0.4
RAB5BP61020 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RAB5BP61020 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.55■□□□□ 0.4
RAB5BP61020 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RAB5BP61020 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5BP61020 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5BP61020 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5BP61020 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5BP61020 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RAB5BP61020 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RAB5BP61020 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5BP61020 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5BP61020 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5BP61020 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5BP61020 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5BP61020 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5BP61020 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5BP61020 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5BP61020 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5BP61020 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
RAB5BP61020 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5BP61020 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
RAB5BP61020 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB5BP61020 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB5BP61020 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5BP61020 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RAB5BP61020 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5BP61020 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB5BP61020 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5BP61020 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB5BP61020 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
RAB5BP61020 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB5BP61020 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB5BP61020 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RAB5BP61020 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB5BP61020 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB5BP61020 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB5BP61020 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB5BP61020 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB5BP61020 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB5BP61020 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB5BP61020 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB5BP61020 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB5BP61020 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB5BP61020 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB5BP61020 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB5BP61020 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms