Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN6P56747 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN6P56747 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN6P56747 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN6P56747 AC091060.1-201ENST00000623524 1766 ntBASIC21.62■■□□□ 1.05
CLDN6P56747 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.62■■□□□ 1.05
CLDN6P56747 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN6P56747 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.62■■□□□ 1.05
CLDN6P56747 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
CLDN6P56747 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.62■■□□□ 1.05
CLDN6P56747 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN6P56747 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
CLDN6P56747 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN6P56747 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
CLDN6P56747 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN6P56747 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CLDN6P56747 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN6P56747 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN6P56747 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN6P56747 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.61■■□□□ 1.05
CLDN6P56747 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.61■■□□□ 1.05
CLDN6P56747 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.61■■□□□ 1.05
CLDN6P56747 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.61■■□□□ 1.05
CLDN6P56747 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.61■■□□□ 1.05
CLDN6P56747 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN6P56747 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN6P56747 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN6P56747 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN6P56747 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN6P56747 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN6P56747 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.6■■□□□ 1.05
CLDN6P56747 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.6■■□□□ 1.05
CLDN6P56747 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN6P56747 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.6■■□□□ 1.05
CLDN6P56747 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.6■■□□□ 1.05
CLDN6P56747 AC141586.4-201ENST00000624558 1573 ntBASIC21.6■■□□□ 1.05
CLDN6P56747 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CLDN6P56747 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN6P56747 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN6P56747 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN6P56747 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.59■■□□□ 1.05
CLDN6P56747 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN6P56747 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN6P56747 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.59■■□□□ 1.05
CLDN6P56747 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN6P56747 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.59■■□□□ 1.05
CLDN6P56747 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN6P56747 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.59■■□□□ 1.05
CLDN6P56747 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.58■■□□□ 1.05
CLDN6P56747 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CLDN6P56747 TERF1P2-201ENST00000583350 1212 ntBASIC21.58■■□□□ 1.05
CLDN6P56747 AL354811.1-201ENST00000610286 706 ntBASIC21.58■■□□□ 1.05
CLDN6P56747 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLDN6P56747 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
CLDN6P56747 AC133637.1-201ENST00000624115 1537 ntBASIC21.58■■□□□ 1.04
CLDN6P56747 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
CLDN6P56747 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CLDN6P56747 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN6P56747 ALDH1A3-203ENST00000557963 1670 ntBASIC21.57■■□□□ 1.04
CLDN6P56747 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.57■■□□□ 1.04
CLDN6P56747 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.57■■□□□ 1.04
CLDN6P56747 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN6P56747 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.57■■□□□ 1.04
CLDN6P56747 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.57■■□□□ 1.04
CLDN6P56747 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN6P56747 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLDN6P56747 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLDN6P56747 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLDN6P56747 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLDN6P56747 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.56■■□□□ 1.04
CLDN6P56747 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.56■■□□□ 1.04
CLDN6P56747 KRT18P61-201ENST00000585825 1298 ntBASIC21.56■■□□□ 1.04
CLDN6P56747 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.56■■□□□ 1.04
CLDN6P56747 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CLDN6P56747 AC135731.1-201ENST00000569415 2548 ntBASIC21.56■■□□□ 1.04
CLDN6P56747 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLDN6P56747 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CLDN6P56747 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.55■■□□□ 1.04
CLDN6P56747 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.55■■□□□ 1.04
CLDN6P56747 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN6P56747 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN6P56747 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.55■■□□□ 1.04
CLDN6P56747 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN6P56747 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN6P56747 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
CLDN6P56747 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN6P56747 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN6P56747 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.55■■□□□ 1.04
CLDN6P56747 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN6P56747 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN6P56747 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN6P56747 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.54■■□□□ 1.04
CLDN6P56747 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CLDN6P56747 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.54■■□□□ 1.04
CLDN6P56747 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.54■■□□□ 1.04
CLDN6P56747 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN6P56747 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN6P56747 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN6P56747 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN6P56747 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms