Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXG1P55316 SERBP1P1-201ENST00000396021 1160 ntBASIC19.7■□□□□ 0.74
FOXG1P55316 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXG1P55316 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.7■□□□□ 0.74
FOXG1P55316 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.7■□□□□ 0.74
FOXG1P55316 AL139246.5-201ENST00000606645 996 ntBASIC19.7■□□□□ 0.74
FOXG1P55316 AC009086.3-201ENST00000623486 1008 ntBASIC19.7■□□□□ 0.74
FOXG1P55316 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.7■□□□□ 0.74
FOXG1P55316 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXG1P55316 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.7■□□□□ 0.74
FOXG1P55316 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
FOXG1P55316 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXG1P55316 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXG1P55316 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXG1P55316 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXG1P55316 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXG1P55316 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXG1P55316 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
FOXG1P55316 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.69■□□□□ 0.74
FOXG1P55316 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXG1P55316 AL136162.1-201ENST00000607711 1078 ntBASIC19.69■□□□□ 0.74
FOXG1P55316 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.69■□□□□ 0.74
FOXG1P55316 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.69■□□□□ 0.74
FOXG1P55316 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
FOXG1P55316 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXG1P55316 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXG1P55316 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXG1P55316 ANOS2P-203ENST00000472227 1816 ntBASIC19.69■□□□□ 0.74
FOXG1P55316 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXG1P55316 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.68■□□□□ 0.74
FOXG1P55316 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.68■□□□□ 0.74
FOXG1P55316 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXG1P55316 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXG1P55316 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
FOXG1P55316 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
FOXG1P55316 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXG1P55316 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.68■□□□□ 0.74
FOXG1P55316 PBX2P1-201ENST00000493219 1291 ntBASIC19.68■□□□□ 0.74
FOXG1P55316 AC024257.2-201ENST00000549699 147 ntBASIC19.68■□□□□ 0.74
FOXG1P55316 AC241377.3-202ENST00000626088 1088 ntBASIC19.68■□□□□ 0.74
FOXG1P55316 AC241585.3-202ENST00000628937 1088 ntBASIC19.68■□□□□ 0.74
FOXG1P55316 AC245100.8-202ENST00000629247 1058 ntBASIC19.68■□□□□ 0.74
FOXG1P55316 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.68■□□□□ 0.74
FOXG1P55316 SYT6-210ENST00000641643 1587 ntBASIC19.68■□□□□ 0.74
FOXG1P55316 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXG1P55316 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXG1P55316 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.68■□□□□ 0.74
FOXG1P55316 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXG1P55316 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXG1P55316 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
FOXG1P55316 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.67■□□□□ 0.74
FOXG1P55316 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FOXG1P55316 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXG1P55316 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXG1P55316 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXG1P55316 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXG1P55316 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.66■□□□□ 0.74
FOXG1P55316 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXG1P55316 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXG1P55316 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.66■□□□□ 0.74
FOXG1P55316 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXG1P55316 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXG1P55316 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXG1P55316 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.66■□□□□ 0.74
FOXG1P55316 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.66■□□□□ 0.74
FOXG1P55316 MIR3181-201ENST00000578512 73 ntBASIC19.66■□□□□ 0.74
FOXG1P55316 pRNA.6-201ENST00000610482 90 ntBASIC19.66■□□□□ 0.74
FOXG1P55316 pRNA.5-201ENST00000612139 90 ntBASIC19.66■□□□□ 0.74
FOXG1P55316 pRNA.11-201ENST00000618423 90 ntBASIC19.66■□□□□ 0.74
FOXG1P55316 pRNA.13-201ENST00000619112 90 ntBASIC19.66■□□□□ 0.74
FOXG1P55316 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.66■□□□□ 0.74
FOXG1P55316 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXG1P55316 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXG1P55316 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXG1P55316 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXG1P55316 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXG1P55316 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
FOXG1P55316 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FOXG1P55316 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.65■□□□□ 0.74
FOXG1P55316 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXG1P55316 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXG1P55316 AL353803.4-201ENST00000565882 1934 ntBASIC19.65■□□□□ 0.74
FOXG1P55316 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXG1P55316 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXG1P55316 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXG1P55316 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FOXG1P55316 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.65■□□□□ 0.74
FOXG1P55316 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
FOXG1P55316 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXG1P55316 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXG1P55316 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
FOXG1P55316 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
FOXG1P55316 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXG1P55316 MIR638-201ENST00000385237 100 ntBASIC19.64■□□□□ 0.73
FOXG1P55316 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
FOXG1P55316 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.64■□□□□ 0.73
FOXG1P55316 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
FOXG1P55316 AC092171.4-201ENST00000609130 632 ntBASIC19.64■□□□□ 0.73
FOXG1P55316 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXG1P55316 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms