Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PSMD4P55036 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PSMD4P55036 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.78■□□□□ 0.92
PSMD4P55036 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.78■□□□□ 0.92
PSMD4P55036 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PSMD4P55036 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.78■□□□□ 0.92
PSMD4P55036 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.78■□□□□ 0.92
PSMD4P55036 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PSMD4P55036 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.78■□□□□ 0.92
PSMD4P55036 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PSMD4P55036 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PSMD4P55036 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.78■□□□□ 0.92
PSMD4P55036 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PSMD4P55036 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PSMD4P55036 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.77■□□□□ 0.92
PSMD4P55036 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.77■□□□□ 0.92
PSMD4P55036 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PSMD4P55036 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.77■□□□□ 0.92
PSMD4P55036 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PSMD4P55036 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PSMD4P55036 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PSMD4P55036 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PSMD4P55036 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
PSMD4P55036 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PSMD4P55036 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PSMD4P55036 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PSMD4P55036 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PSMD4P55036 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PSMD4P55036 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.76■□□□□ 0.91
PSMD4P55036 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PSMD4P55036 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PSMD4P55036 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PSMD4P55036 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.76■□□□□ 0.91
PSMD4P55036 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PSMD4P55036 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PSMD4P55036 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PSMD4P55036 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.75■□□□□ 0.91
PSMD4P55036 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PSMD4P55036 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PSMD4P55036 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PSMD4P55036 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PSMD4P55036 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
PSMD4P55036 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PSMD4P55036 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PSMD4P55036 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PSMD4P55036 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PSMD4P55036 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PSMD4P55036 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.74■□□□□ 0.91
PSMD4P55036 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.74■□□□□ 0.91
PSMD4P55036 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PSMD4P55036 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PSMD4P55036 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PSMD4P55036 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PSMD4P55036 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.74■□□□□ 0.91
PSMD4P55036 AL117332.1-201ENST00000622628 974 ntBASIC20.74■□□□□ 0.91
PSMD4P55036 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PSMD4P55036 DUSP8P3-201ENST00000399571 1760 ntBASIC20.74■□□□□ 0.91
PSMD4P55036 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PSMD4P55036 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PSMD4P55036 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PSMD4P55036 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PSMD4P55036 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PSMD4P55036 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PSMD4P55036 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PSMD4P55036 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.73■□□□□ 0.91
PSMD4P55036 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.73■□□□□ 0.91
PSMD4P55036 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
PSMD4P55036 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.73■□□□□ 0.91
PSMD4P55036 MIR3621-201ENST00000580529 85 ntBASIC20.73■□□□□ 0.91
PSMD4P55036 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PSMD4P55036 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PSMD4P55036 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PSMD4P55036 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PSMD4P55036 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PSMD4P55036 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PSMD4P55036 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.72■□□□□ 0.91
PSMD4P55036 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.72■□□□□ 0.91
PSMD4P55036 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.72■□□□□ 0.91
PSMD4P55036 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.72■□□□□ 0.91
PSMD4P55036 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PSMD4P55036 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.72■□□□□ 0.91
PSMD4P55036 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PSMD4P55036 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PSMD4P55036 AC009102.2-201ENST00000606772 1639 ntBASIC20.71■□□□□ 0.91
PSMD4P55036 AC144652.1-201ENST00000609974 1624 ntBASIC20.71■□□□□ 0.91
PSMD4P55036 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PSMD4P55036 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.71■□□□□ 0.91
PSMD4P55036 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PSMD4P55036 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PSMD4P55036 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
PSMD4P55036 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.7■□□□□ 0.9
PSMD4P55036 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PSMD4P55036 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PSMD4P55036 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.7■□□□□ 0.9
PSMD4P55036 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.7■□□□□ 0.9
PSMD4P55036 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PSMD4P55036 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PSMD4P55036 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.7■□□□□ 0.9
PSMD4P55036 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PSMD4P55036 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms