Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGA2P52926 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HMGA2P52926 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HMGA2P52926 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.53■□□□□ 0.88
HMGA2P52926 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HMGA2P52926 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.53■□□□□ 0.88
HMGA2P52926 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HMGA2P52926 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGA2P52926 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HMGA2P52926 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HMGA2P52926 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HMGA2P52926 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HMGA2P52926 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGA2P52926 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.53■□□□□ 0.88
HMGA2P52926 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HMGA2P52926 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGA2P52926 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HMGA2P52926 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HMGA2P52926 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGA2P52926 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
HMGA2P52926 AC120024.1-201ENST00000562672 995 ntBASIC20.52■□□□□ 0.88
HMGA2P52926 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.52■□□□□ 0.88
HMGA2P52926 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGA2P52926 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGA2P52926 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.52■□□□□ 0.87
HMGA2P52926 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.52■□□□□ 0.87
HMGA2P52926 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.52■□□□□ 0.87
HMGA2P52926 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGA2P52926 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
HMGA2P52926 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.51■□□□□ 0.87
HMGA2P52926 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.51■□□□□ 0.87
HMGA2P52926 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.51■□□□□ 0.87
HMGA2P52926 KRT18P24-201ENST00000344739 1156 ntBASIC20.51■□□□□ 0.87
HMGA2P52926 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.51■□□□□ 0.87
HMGA2P52926 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGA2P52926 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
HMGA2P52926 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGA2P52926 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.51■□□□□ 0.87
HMGA2P52926 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGA2P52926 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HMGA2P52926 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
HMGA2P52926 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
HMGA2P52926 AC092053.2-201ENST00000640557 1818 ntBASIC20.5■□□□□ 0.87
HMGA2P52926 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
HMGA2P52926 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.5■□□□□ 0.87
HMGA2P52926 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGA2P52926 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HMGA2P52926 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.5■□□□□ 0.87
HMGA2P52926 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HMGA2P52926 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGA2P52926 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HMGA2P52926 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGA2P52926 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
HMGA2P52926 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HMGA2P52926 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGA2P52926 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGA2P52926 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGA2P52926 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.49■□□□□ 0.87
HMGA2P52926 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGA2P52926 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
HMGA2P52926 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGA2P52926 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HMGA2P52926 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGA2P52926 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.49■□□□□ 0.87
HMGA2P52926 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGA2P52926 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.49■□□□□ 0.87
HMGA2P52926 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HMGA2P52926 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
HMGA2P52926 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGA2P52926 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
HMGA2P52926 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.48■□□□□ 0.87
HMGA2P52926 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGA2P52926 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.48■□□□□ 0.87
HMGA2P52926 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGA2P52926 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
HMGA2P52926 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.47■□□□□ 0.87
HMGA2P52926 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.47■□□□□ 0.87
HMGA2P52926 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.47■□□□□ 0.87
HMGA2P52926 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.47■□□□□ 0.87
HMGA2P52926 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGA2P52926 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.47■□□□□ 0.87
HMGA2P52926 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.47■□□□□ 0.87
HMGA2P52926 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGA2P52926 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.47■□□□□ 0.87
HMGA2P52926 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
HMGA2P52926 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.47■□□□□ 0.87
HMGA2P52926 C11orf96-202ENST00000528572 1834 ntBASIC20.47■□□□□ 0.87
HMGA2P52926 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HMGA2P52926 AC007375.3-201ENST00000600936 2314 ntBASIC20.47■□□□□ 0.87
HMGA2P52926 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGA2P52926 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGA2P52926 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.46■□□□□ 0.87
HMGA2P52926 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGA2P52926 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGA2P52926 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
HMGA2P52926 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGA2P52926 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMGA2P52926 AC139795.1-202ENST00000500444 432 ntBASIC20.46■□□□□ 0.87
HMGA2P52926 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGA2P52926 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms