Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EFNA3P52797 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
EFNA3P52797 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
EFNA3P52797 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EFNA3P52797 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.02■□□□□ 0.96
EFNA3P52797 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.02■□□□□ 0.96
EFNA3P52797 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.02■□□□□ 0.96
EFNA3P52797 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
EFNA3P52797 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
EFNA3P52797 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
EFNA3P52797 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EFNA3P52797 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EFNA3P52797 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
EFNA3P52797 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EFNA3P52797 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EFNA3P52797 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
EFNA3P52797 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.01■□□□□ 0.95
EFNA3P52797 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
EFNA3P52797 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EFNA3P52797 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.01■□□□□ 0.95
EFNA3P52797 AP001330.3-201ENST00000520123 633 ntBASIC21.01■□□□□ 0.95
EFNA3P52797 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.01■□□□□ 0.95
EFNA3P52797 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.01■□□□□ 0.95
EFNA3P52797 AC092171.4-201ENST00000609130 632 ntBASIC21.01■□□□□ 0.95
EFNA3P52797 pRNA.6-201ENST00000610482 90 ntBASIC21.01■□□□□ 0.95
EFNA3P52797 pRNA.5-201ENST00000612139 90 ntBASIC21.01■□□□□ 0.95
EFNA3P52797 pRNA.11-201ENST00000618423 90 ntBASIC21.01■□□□□ 0.95
EFNA3P52797 pRNA.13-201ENST00000619112 90 ntBASIC21.01■□□□□ 0.95
EFNA3P52797 AC093323.1-202ENST00000635031 2045 ntBASIC21■□□□□ 0.95
EFNA3P52797 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
EFNA3P52797 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21■□□□□ 0.95
EFNA3P52797 AC079630.1-202ENST00000618127 1840 ntBASIC21■□□□□ 0.95
EFNA3P52797 EDA-201ENST00000338901 1233 ntBASIC21■□□□□ 0.95
EFNA3P52797 HES6-206ENST00000409574 738 ntTSL 2 BASIC21■□□□□ 0.95
EFNA3P52797 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21■□□□□ 0.95
EFNA3P52797 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21■□□□□ 0.95
EFNA3P52797 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21■□□□□ 0.95
EFNA3P52797 GRAMD4P4-201ENST00000613563 1115 ntBASIC21■□□□□ 0.95
EFNA3P52797 AC011298.3-201ENST00000615796 283 ntBASIC21■□□□□ 0.95
EFNA3P52797 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21■□□□□ 0.95
EFNA3P52797 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21■□□□□ 0.95
EFNA3P52797 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
EFNA3P52797 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EFNA3P52797 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.99■□□□□ 0.95
EFNA3P52797 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EFNA3P52797 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EFNA3P52797 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.99■□□□□ 0.95
EFNA3P52797 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
EFNA3P52797 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EFNA3P52797 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
EFNA3P52797 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
EFNA3P52797 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EFNA3P52797 AF213884.3-201ENST00000563833 479 ntBASIC20.99■□□□□ 0.95
EFNA3P52797 AL138724.1-201ENST00000606771 1088 ntBASIC20.99■□□□□ 0.95
EFNA3P52797 AL136967.2-201ENST00000623968 743 ntBASIC20.99■□□□□ 0.95
EFNA3P52797 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EFNA3P52797 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EFNA3P52797 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EFNA3P52797 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EFNA3P52797 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
EFNA3P52797 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EFNA3P52797 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
EFNA3P52797 AC144652.1-201ENST00000609974 1624 ntBASIC20.98■□□□□ 0.95
EFNA3P52797 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.98■□□□□ 0.95
EFNA3P52797 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EFNA3P52797 MIR939-201ENST00000401314 82 ntBASIC20.98■□□□□ 0.95
EFNA3P52797 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.98■□□□□ 0.95
EFNA3P52797 AL355001.2-201ENST00000620617 1191 ntBASIC20.98■□□□□ 0.95
EFNA3P52797 AC136469.2-201ENST00000623944 1028 ntBASIC20.98■□□□□ 0.95
EFNA3P52797 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.98■□□□□ 0.95
EFNA3P52797 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EFNA3P52797 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EFNA3P52797 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EFNA3P52797 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EFNA3P52797 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFNA3P52797 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EFNA3P52797 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.97■□□□□ 0.95
EFNA3P52797 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFNA3P52797 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EFNA3P52797 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.97■□□□□ 0.95
EFNA3P52797 AC142381.2-201ENST00000566120 298 ntBASIC20.97■□□□□ 0.95
EFNA3P52797 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFNA3P52797 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFNA3P52797 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFNA3P52797 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EFNA3P52797 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFNA3P52797 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFNA3P52797 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFNA3P52797 ZNRF2P3-201ENST00000424200 374 ntBASIC20.96■□□□□ 0.95
EFNA3P52797 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EFNA3P52797 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFNA3P52797 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EFNA3P52797 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EFNA3P52797 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
EFNA3P52797 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EFNA3P52797 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.95■□□□□ 0.94
EFNA3P52797 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EFNA3P52797 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
EFNA3P52797 DUX4L4-201ENST00000566884 1269 ntBASIC20.95■□□□□ 0.94
EFNA3P52797 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms