Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF144AP50876 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF144AP50876 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF144AP50876 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
RNF144AP50876 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
RNF144AP50876 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF144AP50876 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF144AP50876 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF144AP50876 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF144AP50876 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF144AP50876 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF144AP50876 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
RNF144AP50876 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF144AP50876 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF144AP50876 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF144AP50876 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF144AP50876 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF144AP50876 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RNF144AP50876 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF144AP50876 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF144AP50876 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RNF144AP50876 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
RNF144AP50876 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF144AP50876 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.73■□□□□ 0.91
RNF144AP50876 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF144AP50876 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF144AP50876 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF144AP50876 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF144AP50876 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
RNF144AP50876 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF144AP50876 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
RNF144AP50876 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF144AP50876 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF144AP50876 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF144AP50876 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.72■□□□□ 0.91
RNF144AP50876 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.72■□□□□ 0.91
RNF144AP50876 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF144AP50876 MIR6722-201ENST00000617286 78 ntBASIC20.72■□□□□ 0.91
RNF144AP50876 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF144AP50876 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF144AP50876 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF144AP50876 AC005703.6-201ENST00000623265 1329 ntBASIC20.72■□□□□ 0.91
RNF144AP50876 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF144AP50876 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF144AP50876 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF144AP50876 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF144AP50876 AC092068.2-201ENST00000590491 1708 ntBASIC20.71■□□□□ 0.91
RNF144AP50876 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RNF144AP50876 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.71■□□□□ 0.91
RNF144AP50876 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF144AP50876 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF144AP50876 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF144AP50876 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RNF144AP50876 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF144AP50876 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RNF144AP50876 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF144AP50876 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RNF144AP50876 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF144AP50876 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.7■□□□□ 0.91
RNF144AP50876 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF144AP50876 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF144AP50876 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF144AP50876 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF144AP50876 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF144AP50876 GUSBP5-201ENST00000418136 578 ntBASIC20.7■□□□□ 0.9
RNF144AP50876 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF144AP50876 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF144AP50876 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF144AP50876 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF144AP50876 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF144AP50876 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF144AP50876 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF144AP50876 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF144AP50876 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF144AP50876 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF144AP50876 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF144AP50876 KRT16P3-201ENST00000439127 1283 ntBASIC20.69■□□□□ 0.9
RNF144AP50876 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.69■□□□□ 0.9
RNF144AP50876 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.69■□□□□ 0.9
RNF144AP50876 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RNF144AP50876 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF144AP50876 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RNF144AP50876 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF144AP50876 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF144AP50876 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF144AP50876 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF144AP50876 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF144AP50876 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RNF144AP50876 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF144AP50876 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF144AP50876 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF144AP50876 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RNF144AP50876 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF144AP50876 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF144AP50876 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF144AP50876 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF144AP50876 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF144AP50876 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RNF144AP50876 DUSP8P3-201ENST00000399571 1760 ntBASIC20.67■□□□□ 0.9
RNF144AP50876 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms