Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC9A3P48764 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC9A3P48764 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC9A3P48764 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.43■□□□□ 0.86
SLC9A3P48764 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC9A3P48764 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC9A3P48764 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC9A3P48764 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC9A3P48764 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC9A3P48764 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC9A3P48764 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC9A3P48764 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC9A3P48764 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.42■□□□□ 0.86
SLC9A3P48764 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SLC9A3P48764 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC9A3P48764 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SLC9A3P48764 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC9A3P48764 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC9A3P48764 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC9A3P48764 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SLC9A3P48764 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC9A3P48764 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC9A3P48764 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
SLC9A3P48764 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC9A3P48764 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC9A3P48764 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.41■□□□□ 0.86
SLC9A3P48764 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC9A3P48764 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.41■□□□□ 0.86
SLC9A3P48764 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC9A3P48764 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC9A3P48764 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC9A3P48764 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC9A3P48764 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC9A3P48764 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC9A3P48764 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC9A3P48764 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC9A3P48764 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC9A3P48764 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC9A3P48764 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC9A3P48764 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
SLC9A3P48764 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC9A3P48764 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC9A3P48764 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC9A3P48764 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC9A3P48764 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC9A3P48764 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SLC9A3P48764 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SLC9A3P48764 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC9A3P48764 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
SLC9A3P48764 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.39■□□□□ 0.85
SLC9A3P48764 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SLC9A3P48764 AL033527.3-201ENST00000566366 1196 ntBASIC20.39■□□□□ 0.85
SLC9A3P48764 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SLC9A3P48764 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.39■□□□□ 0.85
SLC9A3P48764 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SLC9A3P48764 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC9A3P48764 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC9A3P48764 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC9A3P48764 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SLC9A3P48764 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.38■□□□□ 0.85
SLC9A3P48764 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC9A3P48764 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC9A3P48764 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.38■□□□□ 0.85
SLC9A3P48764 LINC00526-201ENST00000581067 1875 ntBASIC20.38■□□□□ 0.85
SLC9A3P48764 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC9A3P48764 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
SLC9A3P48764 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC9A3P48764 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC9A3P48764 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC9A3P48764 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC9A3P48764 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC9A3P48764 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC9A3P48764 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SLC9A3P48764 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
SLC9A3P48764 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC9A3P48764 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC9A3P48764 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC9A3P48764 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC9A3P48764 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC9A3P48764 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC9A3P48764 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC9A3P48764 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC9A3P48764 AC127496.7-201ENST00000625110 1798 ntBASIC20.36■□□□□ 0.85
SLC9A3P48764 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
SLC9A3P48764 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.36■□□□□ 0.85
SLC9A3P48764 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC9A3P48764 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SLC9A3P48764 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
SLC9A3P48764 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC9A3P48764 C1orf229-201ENST00000623686 2258 ntBASIC20.36■□□□□ 0.85
SLC9A3P48764 AC137767.1-201ENST00000602918 1920 ntBASIC20.36■□□□□ 0.85
SLC9A3P48764 YBX1P4-201ENST00000392794 808 ntBASIC20.36■□□□□ 0.85
SLC9A3P48764 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC9A3P48764 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC9A3P48764 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC9A3P48764 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC9A3P48764 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC9A3P48764 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC9A3P48764 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC9A3P48764 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms