Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC1A3P43003 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC1A3P43003 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC1A3P43003 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC1A3P43003 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SLC1A3P43003 AC005703.6-201ENST00000623265 1329 ntBASIC20.56■□□□□ 0.88
SLC1A3P43003 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A3P43003 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A3P43003 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A3P43003 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A3P43003 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC1A3P43003 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC1A3P43003 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.56■□□□□ 0.88
SLC1A3P43003 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A3P43003 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A3P43003 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A3P43003 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A3P43003 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A3P43003 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A3P43003 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A3P43003 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
SLC1A3P43003 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A3P43003 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A3P43003 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A3P43003 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A3P43003 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SLC1A3P43003 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A3P43003 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SLC1A3P43003 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC1A3P43003 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A3P43003 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
SLC1A3P43003 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A3P43003 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC1A3P43003 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC1A3P43003 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SLC1A3P43003 MTDHP2-201ENST00000601468 714 ntBASIC20.54■□□□□ 0.88
SLC1A3P43003 AL035685.1-201ENST00000636663 812 ntBASIC20.54■□□□□ 0.88
SLC1A3P43003 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC1A3P43003 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SLC1A3P43003 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A3P43003 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A3P43003 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SLC1A3P43003 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC1A3P43003 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SLC1A3P43003 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC1A3P43003 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC1A3P43003 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SLC1A3P43003 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SLC1A3P43003 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC1A3P43003 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SLC1A3P43003 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SLC1A3P43003 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A3P43003 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A3P43003 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A3P43003 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A3P43003 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.52■□□□□ 0.87
SLC1A3P43003 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
SLC1A3P43003 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.52■□□□□ 0.87
SLC1A3P43003 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
SLC1A3P43003 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A3P43003 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A3P43003 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A3P43003 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A3P43003 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A3P43003 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC1A3P43003 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A3P43003 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC1A3P43003 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A3P43003 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A3P43003 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC1A3P43003 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A3P43003 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A3P43003 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A3P43003 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.5■□□□□ 0.87
SLC1A3P43003 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A3P43003 TSPY9P-201ENST00000440215 945 ntBASIC20.5■□□□□ 0.87
SLC1A3P43003 TSPY11P-201ENST00000442607 1045 ntBASIC20.5■□□□□ 0.87
SLC1A3P43003 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.5■□□□□ 0.87
SLC1A3P43003 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC1A3P43003 AC010997.5-201ENST00000609182 354 ntBASIC20.5■□□□□ 0.87
SLC1A3P43003 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.5■□□□□ 0.87
SLC1A3P43003 EP400NL-214ENST00000641289 2402 ntBASIC20.5■□□□□ 0.87
SLC1A3P43003 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A3P43003 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A3P43003 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SLC1A3P43003 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC1A3P43003 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A3P43003 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A3P43003 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A3P43003 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC1A3P43003 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC1A3P43003 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC1A3P43003 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SLC1A3P43003 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC1A3P43003 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC1A3P43003 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC1A3P43003 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC1A3P43003 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SLC1A3P43003 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC1A3P43003 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms