Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 MTDHP2-201ENST00000601468 714 ntBASIC21.16■□□□□ 0.98
KRT20P35900 SNX5-217ENST00000606557 1087 ntBASIC21.16■□□□□ 0.98
KRT20P35900 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT20P35900 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT20P35900 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT20P35900 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT20P35900 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.15■□□□□ 0.98
KRT20P35900 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT20P35900 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT20P35900 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
KRT20P35900 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.15■□□□□ 0.98
KRT20P35900 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT20P35900 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
KRT20P35900 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT20P35900 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT20P35900 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.14■□□□□ 0.98
KRT20P35900 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRT20P35900 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
KRT20P35900 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRT20P35900 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.14■□□□□ 0.98
KRT20P35900 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRT20P35900 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.14■□□□□ 0.98
KRT20P35900 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
KRT20P35900 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
KRT20P35900 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT20P35900 EP400NL-214ENST00000641289 2402 ntBASIC21.14■□□□□ 0.97
KRT20P35900 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT20P35900 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
KRT20P35900 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.14■□□□□ 0.97
KRT20P35900 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.14■□□□□ 0.97
KRT20P35900 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KRT20P35900 AC233723.2-201ENST00000623798 2106 ntBASIC21.14■□□□□ 0.97
KRT20P35900 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT20P35900 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.14■□□□□ 0.97
KRT20P35900 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT20P35900 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
KRT20P35900 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.13■□□□□ 0.97
KRT20P35900 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.13■□□□□ 0.97
KRT20P35900 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.13■□□□□ 0.97
KRT20P35900 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT20P35900 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.13■□□□□ 0.97
KRT20P35900 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT20P35900 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.13■□□□□ 0.97
KRT20P35900 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KRT20P35900 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT20P35900 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.13■□□□□ 0.97
KRT20P35900 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.13■□□□□ 0.97
KRT20P35900 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KRT20P35900 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
KRT20P35900 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KRT20P35900 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT20P35900 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.12■□□□□ 0.97
KRT20P35900 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT20P35900 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KRT20P35900 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT20P35900 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.12■□□□□ 0.97
KRT20P35900 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.12■□□□□ 0.97
KRT20P35900 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KRT20P35900 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
KRT20P35900 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT20P35900 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT20P35900 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.12■□□□□ 0.97
KRT20P35900 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT20P35900 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
KRT20P35900 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRT20P35900 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT20P35900 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRT20P35900 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRT20P35900 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT20P35900 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT20P35900 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT20P35900 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT20P35900 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT20P35900 LINC00565-201ENST00000562710 2331 ntBASIC21.1■□□□□ 0.97
KRT20P35900 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
KRT20P35900 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.1■□□□□ 0.97
KRT20P35900 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.1■□□□□ 0.97
KRT20P35900 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT20P35900 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT20P35900 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT20P35900 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT20P35900 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.09■□□□□ 0.97
KRT20P35900 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
KRT20P35900 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KRT20P35900 AC010997.5-201ENST00000609182 354 ntBASIC21.09■□□□□ 0.97
KRT20P35900 MIR6722-201ENST00000617286 78 ntBASIC21.09■□□□□ 0.97
KRT20P35900 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT20P35900 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT20P35900 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT20P35900 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KRT20P35900 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KRT20P35900 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
KRT20P35900 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
KRT20P35900 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
KRT20P35900 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT20P35900 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT20P35900 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
KRT20P35900 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT20P35900 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
KRT20P35900 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms