Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
CLCN1P35523 FBXW4P1-201ENST00000426721 2239 ntBASIC25.4■■□□□ 1.66
CLCN1P35523 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CLCN1P35523 AL592293.1-201ENST00000502889 1188 ntBASIC25.4■■□□□ 1.66
CLCN1P35523 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.4■■□□□ 1.66
CLCN1P35523 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CLCN1P35523 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CLCN1P35523 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
CLCN1P35523 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CLCN1P35523 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
CLCN1P35523 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CLCN1P35523 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
CLCN1P35523 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.39■■□□□ 1.66
CLCN1P35523 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.39■■□□□ 1.65
CLCN1P35523 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC25.39■■□□□ 1.65
CLCN1P35523 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CLCN1P35523 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC25.38■■□□□ 1.65
CLCN1P35523 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC25.38■■□□□ 1.65
CLCN1P35523 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
CLCN1P35523 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.38■■□□□ 1.65
CLCN1P35523 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CLCN1P35523 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CLCN1P35523 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CLCN1P35523 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLCN1P35523 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLCN1P35523 AC092068.2-201ENST00000590491 1708 ntBASIC25.37■■□□□ 1.65
CLCN1P35523 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CLCN1P35523 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLCN1P35523 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CLCN1P35523 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
CLCN1P35523 SPCS2P3-201ENST00000500401 656 ntBASIC25.37■■□□□ 1.65
CLCN1P35523 U85056.1-201ENST00000616429 682 ntBASIC25.37■■□□□ 1.65
CLCN1P35523 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLCN1P35523 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CLCN1P35523 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLCN1P35523 AC026310.3-201ENST00000625186 2373 ntBASIC25.37■■□□□ 1.65
CLCN1P35523 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
CLCN1P35523 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CLCN1P35523 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CLCN1P35523 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CLCN1P35523 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
CLCN1P35523 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.36■■□□□ 1.65
CLCN1P35523 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CLCN1P35523 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CLCN1P35523 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CLCN1P35523 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC25.35■■□□□ 1.65
CLCN1P35523 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CLCN1P35523 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
CLCN1P35523 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CLCN1P35523 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.35■■□□□ 1.65
CLCN1P35523 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
CLCN1P35523 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.35■■□□□ 1.65
CLCN1P35523 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CLCN1P35523 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CLCN1P35523 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC25.35■■□□□ 1.65
CLCN1P35523 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CLCN1P35523 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC25.34■■□□□ 1.65
CLCN1P35523 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CLCN1P35523 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CLCN1P35523 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
CLCN1P35523 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CLCN1P35523 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CLCN1P35523 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CLCN1P35523 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CLCN1P35523 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
CLCN1P35523 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CLCN1P35523 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CLCN1P35523 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CLCN1P35523 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CLCN1P35523 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC25.33■■□□□ 1.65
CLCN1P35523 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CLCN1P35523 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.33■■□□□ 1.65
CLCN1P35523 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CLCN1P35523 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
CLCN1P35523 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CLCN1P35523 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC25.33■■□□□ 1.64
CLCN1P35523 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CLCN1P35523 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CLCN1P35523 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CLCN1P35523 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CLCN1P35523 MIR6089-201ENST00000616698 64 ntBASIC25.32■■□□□ 1.64
CLCN1P35523 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
CLCN1P35523 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CLCN1P35523 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
CLCN1P35523 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CLCN1P35523 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CLCN1P35523 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.31■■□□□ 1.64
CLCN1P35523 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CLCN1P35523 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.31■■□□□ 1.64
CLCN1P35523 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.31■■□□□ 1.64
CLCN1P35523 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CLCN1P35523 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.31■■□□□ 1.64
CLCN1P35523 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CLCN1P35523 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
CLCN1P35523 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC25.3■■□□□ 1.64
CLCN1P35523 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CLCN1P35523 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.3■■□□□ 1.64
CLCN1P35523 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
CLCN1P35523 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC25.3■■□□□ 1.64
CLCN1P35523 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms