Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 EUG1YDR518W 1554 nt5.16□□□□□ -1.58
MSH1P25846 SEC9YGR009C 1956 nt5.16□□□□□ -1.58
MSH1P25846 IWR1YDL115C 1062 nt5.16□□□□□ -1.58
MSH1P25846 NUP42YDR192C 1293 nt5.16□□□□□ -1.58
MSH1P25846 YDR336WYDR336W 945 nt5.16□□□□□ -1.58
MSH1P25846 YHR127WYHR127W 732 nt5.16□□□□□ -1.58
MSH1P25846 FUN19YAL034C 1242 nt5.16□□□□□ -1.58
MSH1P25846 LDB18YLL049W 540 nt5.16□□□□□ -1.58
MSH1P25846 VPS71YML041C 843 nt5.16□□□□□ -1.58
MSH1P25846 FAP1YNL023C 2898 nt5.16□□□□□ -1.58
MSH1P25846 IMD3YLR432W 1572 nt5.16□□□□□ -1.58
MSH1P25846 BUD8YLR353W 1812 nt5.16□□□□□ -1.58
MSH1P25846 GPR1YDL035C 2886 nt5.15□□□□□ -1.58
MSH1P25846 SPR28YDR218C 1272 nt5.15□□□□□ -1.59
MSH1P25846 YGR153WYGR153W 654 nt5.15□□□□□ -1.59
MSH1P25846 YGR219WYGR219W 342 nt5.15□□□□□ -1.59
MSH1P25846 GPP1YIL053W 753 nt5.15□□□□□ -1.59
MSH1P25846 GAT4YIR013C 366 nt5.15□□□□□ -1.59
MSH1P25846 YJR056CYJR056C 711 nt5.15□□□□□ -1.59
MSH1P25846 HEK2YBL032W 1146 nt5.15□□□□□ -1.59
MSH1P25846 YIM1YMR152W 1098 nt5.15□□□□□ -1.59
MSH1P25846 MAK3YPR051W 531 nt5.15□□□□□ -1.59
MSH1P25846 IME4YGL192W 1803 nt5.15□□□□□ -1.59
MSH1P25846 PCA1YBR295W 3651 nt5.15□□□□□ -1.59
MSH1P25846 ESF1YDR365C 1887 nt5.14□□□□□ -1.59
MSH1P25846 RER2YBR002C 861 nt5.14□□□□□ -1.59
MSH1P25846 CMR3YPR013C 954 nt5.14□□□□□ -1.59
MSH1P25846 PXA1YPL147W 2613 nt5.14□□□□□ -1.59
MSH1P25846 MDL1YLR188W 2088 nt5.14□□□□□ -1.59
MSH1P25846 MMT2YPL224C 1455 nt5.13□□□□□ -1.59
MSH1P25846 CNL1YDR357C 369 nt5.13□□□□□ -1.59
MSH1P25846 FRA2YGL220W 363 nt5.13□□□□□ -1.59
MSH1P25846 YJL068CYJL068C 900 nt5.13□□□□□ -1.59
MSH1P25846 SED5YLR026C 1023 nt5.13□□□□□ -1.59
MSH1P25846 YLR462WYLR462W 609 nt5.13□□□□□ -1.59
MSH1P25846 RAD10YML095C 633 nt5.13□□□□□ -1.59
MSH1P25846 YMR084WYMR084W 789 nt5.13□□□□□ -1.59
MSH1P25846 YMR178WYMR178W 825 nt5.13□□□□□ -1.59
MSH1P25846 MDG1YNL173C 1101 nt5.13□□□□□ -1.59
MSH1P25846 SSP2YOR242C 1116 nt5.13□□□□□ -1.59
MSH1P25846 SSO1YPL232W 873 nt5.13□□□□□ -1.59
MSH1P25846 NHP6AYPR052C 282 nt5.13□□□□□ -1.59
MSH1P25846 RFT1YBL020W 1725 nt5.13□□□□□ -1.59
MSH1P25846 HMS1YOR032C 1305 nt5.13□□□□□ -1.59
MSH1P25846 RVB1YDR190C 1392 nt5.13□□□□□ -1.59
MSH1P25846 LAP3YNL239W 1365 nt5.13□□□□□ -1.59
MSH1P25846 FUM1YPL262W 1467 nt5.13□□□□□ -1.59
MSH1P25846 ELO3YLR372W 1038 nt5.12□□□□□ -1.59
MSH1P25846 PSY3YLR376C 729 nt5.12□□□□□ -1.59
MSH1P25846 PET20YPL159C 762 nt5.12□□□□□ -1.59
MSH1P25846 HOT1YMR172W 2160 nt5.12□□□□□ -1.59
MSH1P25846 CLN2YPL256C 1638 nt5.12□□□□□ -1.59
MSH1P25846 STR2YJR130C 1920 nt5.11□□□□□ -1.59
MSH1P25846 RAD16YBR114W 2373 nt5.11□□□□□ -1.59
MSH1P25846 YHL049CYHL049C 816 nt5.11□□□□□ -1.59
MSH1P25846 WSS1YHR134W 810 nt5.11□□□□□ -1.59
MSH1P25846 TTI2YJR136C 1266 nt5.11□□□□□ -1.59
MSH1P25846 CTL1YMR180C 963 nt5.11□□□□□ -1.59
MSH1P25846 YOL166CYOL166C 339 nt5.11□□□□□ -1.59
MSH1P25846 YPL114WYPL114W 420 nt5.11□□□□□ -1.59
MSH1P25846 TYR1YBR166C 1359 nt5.11□□□□□ -1.59
MSH1P25846 SLM5YCR024C 1479 nt5.11□□□□□ -1.59
MSH1P25846 THI21YPL258C 1656 nt5.11□□□□□ -1.59
MSH1P25846 YPL260WYPL260W 1656 nt5.11□□□□□ -1.59
MSH1P25846 GCV1YDR019C 1203 nt5.1□□□□□ -1.59
MSH1P25846 YFT2YDR319C 825 nt5.1□□□□□ -1.59
MSH1P25846 TFB3YDR460W 966 nt5.1□□□□□ -1.59
MSH1P25846 YER133W-AYER133W-A 342 nt5.1□□□□□ -1.59
MSH1P25846 CAX4YGR036C 720 nt5.1□□□□□ -1.59
MSH1P25846 KTR7YIL085C 1554 nt5.1□□□□□ -1.59
MSH1P25846 YMR1YJR110W 2067 nt5.1□□□□□ -1.59
MSH1P25846 TRM13YOL125W 1431 nt5.1□□□□□ -1.59
MSH1P25846 VAM3YOR106W 852 nt5.1□□□□□ -1.59
MSH1P25846 FZO1YBR179C 2568 nt5.1□□□□□ -1.59
MSH1P25846 VBA2YBR293W 1425 nt5.1□□□□□ -1.59
MSH1P25846 NUP116YMR047C 3342 nt5.09□□□□□ -1.59
MSH1P25846 OLE1YGL055W 1533 nt5.09□□□□□ -1.59
MSH1P25846 YDR161WYDR161W 1164 nt5.09□□□□□ -1.59
MSH1P25846 LYS5YGL154C 819 nt5.09□□□□□ -1.59
MSH1P25846 BGL2YGR282C 942 nt5.09□□□□□ -1.59
MSH1P25846 YIL163CYIL163C 354 nt5.09□□□□□ -1.59
MSH1P25846 DID4YKL002W 699 nt5.09□□□□□ -1.59
MSH1P25846 UPS2YLR168C 693 nt5.09□□□□□ -1.59
MSH1P25846 YNR061CYNR061C 660 nt5.09□□□□□ -1.59
MSH1P25846 BBP1YPL255W 1158 nt5.09□□□□□ -1.59
MSH1P25846 THI20YOL055C 1656 nt5.08□□□□□ -1.6
MSH1P25846 SDT1YGL224C 843 nt5.08□□□□□ -1.6
MSH1P25846 ATP14YLR295C 375 nt5.08□□□□□ -1.6
MSH1P25846 YNL134CYNL134C 1131 nt5.08□□□□□ -1.6
MSH1P25846 DSC2YOL073C 969 nt5.08□□□□□ -1.6
MSH1P25846 YMR102CYMR102C 2505 nt5.08□□□□□ -1.6
MSH1P25846 CTT1YGR088W 1689 nt5.08□□□□□ -1.6
MSH1P25846 APJ1YNL077W 1587 nt5.08□□□□□ -1.6
MSH1P25846 PEP5YMR231W 3090 nt5.08□□□□□ -1.6
MSH1P25846 KAR5YMR065W 1515 nt5.07□□□□□ -1.6
MSH1P25846 SFI1YLL003W 2841 nt5.07□□□□□ -1.6
MSH1P25846 MSS2YDL107W 1056 nt5.07□□□□□ -1.6
MSH1P25846 YGL258W-AYGL258W-A 234 nt5.07□□□□□ -1.6
MSH1P25846 LAC1YKL008C 1257 nt5.07□□□□□ -1.6
MSH1P25846 JLP1YLL057C 1239 nt5.07□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms