Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 MBP1YDL056W 2502 nt3.51□□□□□ -1.85
CDC39P25655 NSI1YDR026C 1713 nt3.51□□□□□ -1.85
CDC39P25655 MET7YOR241W 1647 nt3.51□□□□□ -1.85
CDC39P25655 HMX1YLR205C 954 nt3.51□□□□□ -1.85
CDC39P25655 GRC3YLL035W 1899 nt3.51□□□□□ -1.85
CDC39P25655 CDC48YDL126C 2508 nt3.51□□□□□ -1.85
CDC39P25655 EOS1YNL080C 1101 nt3.5□□□□□ -1.85
CDC39P25655 HOF1YMR032W 2010 nt3.5□□□□□ -1.85
CDC39P25655 FDC1YDR539W 1512 nt3.5□□□□□ -1.85
CDC39P25655 YOL075CYOL075C 3885 nt3.5□□□□□ -1.85
CDC39P25655 YDR401WYDR401W 564 nt3.5□□□□□ -1.85
CDC39P25655 HST2YPL015C 1074 nt3.5□□□□□ -1.85
CDC39P25655 NCS6YGL211W 1080 nt3.49□□□□□ -1.85
CDC39P25655 MRS3YJL133W 945 nt3.49□□□□□ -1.85
CDC39P25655 YPL041CYPL041C 624 nt3.49□□□□□ -1.85
CDC39P25655 YNL247WYNL247W 2304 nt3.49□□□□□ -1.85
CDC39P25655 KIC1YHR102W 3243 nt3.49□□□□□ -1.85
CDC39P25655 CDC15YAR019C 2925 nt3.49□□□□□ -1.85
CDC39P25655 SNF2YOR290C 5112 nt3.49□□□□□ -1.85
CDC39P25655 TDA1YMR291W 1761 nt3.49□□□□□ -1.85
CDC39P25655 BAT2YJR148W 1131 nt3.49□□□□□ -1.85
CDC39P25655 MTC4YBR255W 2085 nt3.48□□□□□ -1.85
CDC39P25655 BCP1YDR361C 852 nt3.48□□□□□ -1.85
CDC39P25655 MNN11YJL183W 1269 nt3.48□□□□□ -1.85
CDC39P25655 YAR030CYAR030C 342 nt3.48□□□□□ -1.85
CDC39P25655 RET3YPL010W 570 nt3.48□□□□□ -1.85
CDC39P25655 ECM32YER176W 3366 nt3.48□□□□□ -1.85
CDC39P25655 VAN1YML115C 1608 nt3.48□□□□□ -1.85
CDC39P25655 RAD1YPL022W 3303 nt3.48□□□□□ -1.85
CDC39P25655 MSW1YDR268W 1140 nt3.47□□□□□ -1.85
CDC39P25655 YKL162C-AYKL162C-A 153 nt3.47□□□□□ -1.85
CDC39P25655 YPL113CYPL113C 1191 nt3.47□□□□□ -1.85
CDC39P25655 CYM1YDR430C 2970 nt3.47□□□□□ -1.85
CDC39P25655 GLC3YEL011W 2115 nt3.47□□□□□ -1.85
CDC39P25655 SUA7YPR086W 1038 nt3.47□□□□□ -1.85
CDC39P25655 PWR1PWR1 941 nt3.47□□□□□ -1.85
CDC39P25655 EFM2YBR271W 1260 nt3.47□□□□□ -1.85
CDC39P25655 YPL077CYPL077C 723 nt3.46□□□□□ -1.86
CDC39P25655 PEP5YMR231W 3090 nt3.46□□□□□ -1.86
CDC39P25655 SNF3YDL194W 2655 nt3.46□□□□□ -1.86
CDC39P25655 RIM21YNL294C 1602 nt3.46□□□□□ -1.86
CDC39P25655 ESF1YDR365C 1887 nt3.46□□□□□ -1.86
CDC39P25655 ELO2YCR034W 1044 nt3.46□□□□□ -1.86
CDC39P25655 YHR112CYHR112C 1137 nt3.46□□□□□ -1.86
CDC39P25655 YMR315WYMR315W 1050 nt3.46□□□□□ -1.86
CDC39P25655 ASI2YNL159C 870 nt3.46□□□□□ -1.86
CDC39P25655 ERG5YMR015C 1617 nt3.45□□□□□ -1.86
CDC39P25655 YDR193WYDR193W 399 nt3.45□□□□□ -1.86
CDC39P25655 YHR173CYHR173C 339 nt3.45□□□□□ -1.86
CDC39P25655 MBR1YKL093W 1020 nt3.45□□□□□ -1.86
CDC39P25655 YLR374CYLR374C 390 nt3.45□□□□□ -1.86
CDC39P25655 SSB1YDL229W 1842 nt3.45□□□□□ -1.86
CDC39P25655 SKG6YHR149C 2205 nt3.45□□□□□ -1.86
CDC39P25655 CMK1YFR014C 1341 nt3.45□□□□□ -1.86
CDC39P25655 MET17YLR303W 1335 nt3.45□□□□□ -1.86
CDC39P25655 MET3YJR010W 1536 nt3.45□□□□□ -1.86
CDC39P25655 YKR073CYKR073C 321 nt3.44□□□□□ -1.86
CDC39P25655 SPC105YGL093W 2754 nt3.44□□□□□ -1.86
CDC39P25655 AIP1YMR092C 1848 nt3.44□□□□□ -1.86
CDC39P25655 YCF1YDR135C 4548 nt3.44□□□□□ -1.86
CDC39P25655 COP1YDL145C 3606 nt3.44□□□□□ -1.86
CDC39P25655 KIN4YOR233W 2403 nt3.44□□□□□ -1.86
CDC39P25655 YLH47YPR125W 1365 nt3.44□□□□□ -1.86
CDC39P25655 AHA1YDR214W 1053 nt3.44□□□□□ -1.86
CDC39P25655 DBF2YGR092W 1719 nt3.43□□□□□ -1.86
CDC39P25655 YGL063C-AYGL063C-A 150 nt3.43□□□□□ -1.86
CDC39P25655 YGL214WYGL214W 486 nt3.43□□□□□ -1.86
CDC39P25655 VHS3YOR054C 2025 nt3.43□□□□□ -1.86
CDC39P25655 APL6YGR261C 2430 nt3.43□□□□□ -1.86
CDC39P25655 MTR10YOR160W 2919 nt3.43□□□□□ -1.86
CDC39P25655 FAS2YPL231W 5664 nt3.43□□□□□ -1.86
CDC39P25655 MSS116YDR194C 1995 nt3.43□□□□□ -1.86
CDC39P25655 YMR114CYMR114C 1107 nt3.43□□□□□ -1.86
CDC39P25655 NRK1YNL129W 723 nt3.43□□□□□ -1.86
CDC39P25655 ALG9YNL219C 1668 nt3.43□□□□□ -1.86
CDC39P25655 ATG2YNL242W 4779 nt3.43□□□□□ -1.86
CDC39P25655 MIS1YBR084W 2928 nt3.42□□□□□ -1.86
CDC39P25655 PPQ1YPL179W 1650 nt3.42□□□□□ -1.86
CDC39P25655 HSP30YCR021C 999 nt3.42□□□□□ -1.86
CDC39P25655 ARG4YHR018C 1392 nt3.42□□□□□ -1.86
CDC39P25655 SVF1YDR346C 1446 nt3.41□□□□□ -1.86
CDC39P25655 RPS11AYDR025W 471 nt3.41□□□□□ -1.86
CDC39P25655 NBP2YDR162C 711 nt3.41□□□□□ -1.86
CDC39P25655 RPS0AYGR214W 759 nt3.41□□□□□ -1.86
CDC39P25655 PER33YLR064W 822 nt3.41□□□□□ -1.86
CDC39P25655 YPL162CYPL162C 822 nt3.41□□□□□ -1.86
CDC39P25655 YBR219CYBR219C 384 nt3.41□□□□□ -1.86
CDC39P25655 GAL4YPL248C 2646 nt3.41□□□□□ -1.86
CDC39P25655 VBA2YBR293W 1425 nt3.41□□□□□ -1.86
CDC39P25655 JJJ3YJR097W 519 nt3.41□□□□□ -1.86
CDC39P25655 YNR061CYNR061C 660 nt3.41□□□□□ -1.86
CDC39P25655 TRM44YPL030W 1704 nt3.41□□□□□ -1.86
CDC39P25655 KRS1YDR037W 1776 nt3.4□□□□□ -1.86
CDC39P25655 PDR5YOR153W 4536 nt3.4□□□□□ -1.86
CDC39P25655 NCR1YPL006W 3513 nt3.4□□□□□ -1.86
CDC39P25655 tC(GCA)BtC(GCA)B 72 nt3.4□□□□□ -1.86
CDC39P25655 tC(GCA)GtC(GCA)G 72 nt3.4□□□□□ -1.86
CDC39P25655 tC(GCA)P1tC(GCA)P1 72 nt3.4□□□□□ -1.86
CDC39P25655 tC(GCA)P2tC(GCA)P2 72 nt3.4□□□□□ -1.86
CDC39P25655 YER084WYER084W 387 nt3.4□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms