Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH3P22223 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CDH3P22223 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.8■■□□□ 1.08
CDH3P22223 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
CDH3P22223 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDH3P22223 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CDH3P22223 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.8■■□□□ 1.08
CDH3P22223 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDH3P22223 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDH3P22223 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CDH3P22223 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.79■■□□□ 1.08
CDH3P22223 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CDH3P22223 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.79■■□□□ 1.08
CDH3P22223 AC141586.4-201ENST00000624558 1573 ntBASIC21.79■■□□□ 1.08
CDH3P22223 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH3P22223 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.79■■□□□ 1.08
CDH3P22223 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDH3P22223 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.79■■□□□ 1.08
CDH3P22223 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDH3P22223 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.79■■□□□ 1.08
CDH3P22223 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.79■■□□□ 1.08
CDH3P22223 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH3P22223 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH3P22223 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.79■■□□□ 1.08
CDH3P22223 AC019069.1-201ENST00000610008 1333 ntBASIC21.79■■□□□ 1.08
CDH3P22223 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH3P22223 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH3P22223 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH3P22223 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.78■■□□□ 1.08
CDH3P22223 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH3P22223 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH3P22223 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.78■■□□□ 1.08
CDH3P22223 AL139125.2-201ENST00000623134 1869 ntBASIC21.78■■□□□ 1.08
CDH3P22223 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH3P22223 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH3P22223 AC092171.4-201ENST00000609130 632 ntBASIC21.78■■□□□ 1.08
CDH3P22223 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CDH3P22223 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CDH3P22223 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH3P22223 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH3P22223 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.78■■□□□ 1.08
CDH3P22223 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH3P22223 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.77■■□□□ 1.08
CDH3P22223 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH3P22223 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH3P22223 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CDH3P22223 UNC93B3-201ENST00000308076 687 ntBASIC21.77■■□□□ 1.08
CDH3P22223 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.77■■□□□ 1.08
CDH3P22223 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH3P22223 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.77■■□□□ 1.08
CDH3P22223 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CDH3P22223 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH3P22223 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH3P22223 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.77■■□□□ 1.08
CDH3P22223 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH3P22223 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH3P22223 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
CDH3P22223 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
CDH3P22223 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH3P22223 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.76■■□□□ 1.07
CDH3P22223 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.76■■□□□ 1.07
CDH3P22223 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH3P22223 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH3P22223 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH3P22223 MIR638-201ENST00000385237 100 ntBASIC21.76■■□□□ 1.07
CDH3P22223 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH3P22223 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH3P22223 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
CDH3P22223 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH3P22223 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.76■■□□□ 1.07
CDH3P22223 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH3P22223 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CDH3P22223 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH3P22223 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH3P22223 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH3P22223 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.75■■□□□ 1.07
CDH3P22223 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH3P22223 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.75■■□□□ 1.07
CDH3P22223 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CDH3P22223 PBX2P1-201ENST00000493219 1291 ntBASIC21.75■■□□□ 1.07
CDH3P22223 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH3P22223 DUX4L19-201ENST00000557448 1267 ntBASIC21.75■■□□□ 1.07
CDH3P22223 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH3P22223 C17orf82-201ENST00000623772 1530 ntBASIC21.75■■□□□ 1.07
CDH3P22223 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH3P22223 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH3P22223 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDH3P22223 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CDH3P22223 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH3P22223 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.74■■□□□ 1.07
CDH3P22223 AC099791.2-201ENST00000605725 427 ntBASIC21.74■■□□□ 1.07
CDH3P22223 AL136162.1-201ENST00000607711 1078 ntBASIC21.74■■□□□ 1.07
CDH3P22223 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH3P22223 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH3P22223 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH3P22223 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CDH3P22223 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH3P22223 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDH3P22223 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDH3P22223 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms