Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
MRPL3P09001 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MRPL3P09001 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.04■□□□□ 0.8
MRPL3P09001 AC022616.5-201ENST00000518796 181 ntBASIC20.04■□□□□ 0.8
MRPL3P09001 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MRPL3P09001 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
MRPL3P09001 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.04■□□□□ 0.8
MRPL3P09001 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MRPL3P09001 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
MRPL3P09001 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MRPL3P09001 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MRPL3P09001 ECEL1P1-201ENST00000373592 1742 ntBASIC20.04■□□□□ 0.8
MRPL3P09001 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.04■□□□□ 0.8
MRPL3P09001 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
MRPL3P09001 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.03■□□□□ 0.8
MRPL3P09001 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MRPL3P09001 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.03■□□□□ 0.8
MRPL3P09001 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.03■□□□□ 0.8
MRPL3P09001 AC120024.1-201ENST00000562672 995 ntBASIC20.03■□□□□ 0.8
MRPL3P09001 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MRPL3P09001 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MRPL3P09001 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MRPL3P09001 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.02■□□□□ 0.8
MRPL3P09001 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
MRPL3P09001 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MRPL3P09001 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MRPL3P09001 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.02■□□□□ 0.8
MRPL3P09001 BHLHE23-202ENST00000612929 1109 ntBASIC20.02■□□□□ 0.8
MRPL3P09001 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MRPL3P09001 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.02■□□□□ 0.8
MRPL3P09001 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.02■□□□□ 0.8
MRPL3P09001 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MRPL3P09001 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
MRPL3P09001 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MRPL3P09001 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MRPL3P09001 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.02■□□□□ 0.79
MRPL3P09001 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
MRPL3P09001 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MRPL3P09001 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.01■□□□□ 0.79
MRPL3P09001 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MRPL3P09001 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MRPL3P09001 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
MRPL3P09001 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MRPL3P09001 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MRPL3P09001 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.01■□□□□ 0.79
MRPL3P09001 AC019171.1-201ENST00000601251 1056 ntBASIC20.01■□□□□ 0.79
MRPL3P09001 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MRPL3P09001 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.01■□□□□ 0.79
MRPL3P09001 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
MRPL3P09001 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MRPL3P09001 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.01■□□□□ 0.79
MRPL3P09001 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
MRPL3P09001 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MRPL3P09001 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
MRPL3P09001 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
MRPL3P09001 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
MRPL3P09001 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
MRPL3P09001 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
MRPL3P09001 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20■□□□□ 0.79
MRPL3P09001 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20■□□□□ 0.79
MRPL3P09001 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20■□□□□ 0.79
MRPL3P09001 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20■□□□□ 0.79
MRPL3P09001 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MRPL3P09001 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
MRPL3P09001 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20■□□□□ 0.79
MRPL3P09001 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MRPL3P09001 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MRPL3P09001 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
MRPL3P09001 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
MRPL3P09001 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MRPL3P09001 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.99■□□□□ 0.79
MRPL3P09001 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MRPL3P09001 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
MRPL3P09001 AF131216.4-201ENST00000638924 1588 ntBASIC19.99■□□□□ 0.79
MRPL3P09001 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MRPL3P09001 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MRPL3P09001 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MRPL3P09001 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MRPL3P09001 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MRPL3P09001 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.98■□□□□ 0.79
MRPL3P09001 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MRPL3P09001 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.98■□□□□ 0.79
MRPL3P09001 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.98■□□□□ 0.79
MRPL3P09001 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MRPL3P09001 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MRPL3P09001 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MRPL3P09001 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
MRPL3P09001 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MRPL3P09001 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRPL3P09001 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
MRPL3P09001 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MRPL3P09001 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.97■□□□□ 0.79
MRPL3P09001 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MRPL3P09001 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRPL3P09001 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.97■□□□□ 0.79
MRPL3P09001 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
MRPL3P09001 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MRPL3P09001 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
MRPL3P09001 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.97■□□□□ 0.79
MRPL3P09001 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms