Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CAPN1P07384 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.98■■□□□ 1.11
CAPN1P07384 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CAPN1P07384 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CAPN1P07384 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.98■■□□□ 1.11
CAPN1P07384 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
CAPN1P07384 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CAPN1P07384 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CAPN1P07384 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.97■■□□□ 1.11
CAPN1P07384 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CAPN1P07384 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.97■■□□□ 1.11
CAPN1P07384 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
CAPN1P07384 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.97■■□□□ 1.11
CAPN1P07384 DUSP8P3-201ENST00000399571 1760 ntBASIC21.97■■□□□ 1.11
CAPN1P07384 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CAPN1P07384 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CAPN1P07384 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CAPN1P07384 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CAPN1P07384 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CAPN1P07384 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CAPN1P07384 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CAPN1P07384 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.96■■□□□ 1.11
CAPN1P07384 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.96■■□□□ 1.11
CAPN1P07384 SNX5-217ENST00000606557 1087 ntBASIC21.96■■□□□ 1.11
CAPN1P07384 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CAPN1P07384 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CAPN1P07384 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CAPN1P07384 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CAPN1P07384 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.96■■□□□ 1.11
CAPN1P07384 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CAPN1P07384 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
CAPN1P07384 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CAPN1P07384 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CAPN1P07384 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CAPN1P07384 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.95■■□□□ 1.1
CAPN1P07384 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CAPN1P07384 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CAPN1P07384 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CAPN1P07384 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CAPN1P07384 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CAPN1P07384 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CAPN1P07384 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CAPN1P07384 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CAPN1P07384 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.94■■□□□ 1.1
CAPN1P07384 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CAPN1P07384 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.94■■□□□ 1.1
CAPN1P07384 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CAPN1P07384 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CAPN1P07384 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CAPN1P07384 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CAPN1P07384 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CAPN1P07384 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.94■■□□□ 1.1
CAPN1P07384 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CAPN1P07384 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
CAPN1P07384 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
CAPN1P07384 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
CAPN1P07384 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.93■■□□□ 1.1
CAPN1P07384 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CAPN1P07384 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CAPN1P07384 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
CAPN1P07384 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CAPN1P07384 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.93■■□□□ 1.1
CAPN1P07384 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.93■■□□□ 1.1
CAPN1P07384 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CAPN1P07384 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.93■■□□□ 1.1
CAPN1P07384 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.93■■□□□ 1.1
CAPN1P07384 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CAPN1P07384 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CAPN1P07384 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CAPN1P07384 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.92■■□□□ 1.1
CAPN1P07384 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.92■■□□□ 1.1
CAPN1P07384 AL356740.2-201ENST00000601559 647 ntBASIC21.92■■□□□ 1.1
CAPN1P07384 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CAPN1P07384 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.92■■□□□ 1.1
CAPN1P07384 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CAPN1P07384 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CAPN1P07384 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CAPN1P07384 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CAPN1P07384 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.91■■□□□ 1.1
CAPN1P07384 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.91■■□□□ 1.1
CAPN1P07384 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CAPN1P07384 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.91■■□□□ 1.1
CAPN1P07384 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.91■■□□□ 1.1
CAPN1P07384 MIR4466-201ENST00000606121 54 ntBASIC21.91■■□□□ 1.1
CAPN1P07384 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CAPN1P07384 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CAPN1P07384 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CAPN1P07384 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CAPN1P07384 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CAPN1P07384 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.91■■□□□ 1.1
CAPN1P07384 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CAPN1P07384 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CAPN1P07384 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CAPN1P07384 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.91■■□□□ 1.1
CAPN1P07384 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CAPN1P07384 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CAPN1P07384 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CAPN1P07384 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CAPN1P07384 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.9■■□□□ 1.1
CAPN1P07384 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms