Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
PGK1P00558 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PGK1P00558 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PGK1P00558 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PGK1P00558 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PGK1P00558 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
PGK1P00558 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC25.19■■□□□ 1.62
PGK1P00558 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.19■■□□□ 1.62
PGK1P00558 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.19■■□□□ 1.62
PGK1P00558 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PGK1P00558 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PGK1P00558 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PGK1P00558 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC25.18■■□□□ 1.62
PGK1P00558 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.18■■□□□ 1.62
PGK1P00558 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PGK1P00558 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
PGK1P00558 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PGK1P00558 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.18■■□□□ 1.62
PGK1P00558 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
PGK1P00558 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PGK1P00558 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PGK1P00558 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
PGK1P00558 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
PGK1P00558 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
PGK1P00558 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.17■■□□□ 1.62
PGK1P00558 TERF1P2-201ENST00000583350 1212 ntBASIC25.17■■□□□ 1.62
PGK1P00558 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PGK1P00558 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PGK1P00558 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PGK1P00558 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
PGK1P00558 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.17■■□□□ 1.62
PGK1P00558 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.16■■□□□ 1.62
PGK1P00558 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PGK1P00558 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PGK1P00558 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.16■■□□□ 1.62
PGK1P00558 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PGK1P00558 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC25.16■■□□□ 1.62
PGK1P00558 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PGK1P00558 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PGK1P00558 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PGK1P00558 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PGK1P00558 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
PGK1P00558 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.16■■□□□ 1.62
PGK1P00558 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
PGK1P00558 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PGK1P00558 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
PGK1P00558 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
PGK1P00558 LINC02228-203ENST00000641970 1355 ntBASIC25.15■■□□□ 1.62
PGK1P00558 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PGK1P00558 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PGK1P00558 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
PGK1P00558 AC135731.1-201ENST00000569415 2548 ntBASIC25.14■■□□□ 1.62
PGK1P00558 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
PGK1P00558 AL499627.2-201ENST00000606283 725 ntBASIC25.14■■□□□ 1.62
PGK1P00558 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC25.14■■□□□ 1.62
PGK1P00558 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PGK1P00558 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
PGK1P00558 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
PGK1P00558 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PGK1P00558 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
PGK1P00558 DENND3-207ENST00000518347 850 ntTSL 2 BASIC25.13■■□□□ 1.61
PGK1P00558 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC25.13■■□□□ 1.61
PGK1P00558 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.13■■□□□ 1.61
PGK1P00558 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.13■■□□□ 1.61
PGK1P00558 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PGK1P00558 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PGK1P00558 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.13■■□□□ 1.61
PGK1P00558 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
PGK1P00558 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PGK1P00558 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.12■■□□□ 1.61
PGK1P00558 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.12■■□□□ 1.61
PGK1P00558 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.12■■□□□ 1.61
PGK1P00558 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PGK1P00558 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.11■■□□□ 1.61
PGK1P00558 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PGK1P00558 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PGK1P00558 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PGK1P00558 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.11■■□□□ 1.61
PGK1P00558 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PGK1P00558 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
PGK1P00558 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
PGK1P00558 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PGK1P00558 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC25.11■■□□□ 1.61
PGK1P00558 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.11■■□□□ 1.61
PGK1P00558 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.11■■□□□ 1.61
PGK1P00558 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PGK1P00558 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PGK1P00558 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PGK1P00558 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PGK1P00558 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PGK1P00558 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PGK1P00558 LHPP-203ENST00000392757 840 ntTSL 3 BASIC25.1■■□□□ 1.61
PGK1P00558 NT5C3AP1-201ENST00000394500 1012 ntBASIC25.1■■□□□ 1.61
PGK1P00558 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PGK1P00558 OR2I1P-207ENST00000453522 948 ntBASIC25.1■■□□□ 1.61
PGK1P00558 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PGK1P00558 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PGK1P00558 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
PGK1P00558 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PGK1P00558 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms