Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBL3O95164 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBL3O95164 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
UBL3O95164 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBL3O95164 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
UBL3O95164 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
UBL3O95164 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBL3O95164 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
UBL3O95164 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
UBL3O95164 MIR6722-201ENST00000617286 78 ntBASIC20■□□□□ 0.79
UBL3O95164 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20■□□□□ 0.79
UBL3O95164 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBL3O95164 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20■□□□□ 0.79
UBL3O95164 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
UBL3O95164 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBL3O95164 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UBL3O95164 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBL3O95164 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBL3O95164 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBL3O95164 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
UBL3O95164 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBL3O95164 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
UBL3O95164 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBL3O95164 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBL3O95164 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.99■□□□□ 0.79
UBL3O95164 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.99■□□□□ 0.79
UBL3O95164 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.99■□□□□ 0.79
UBL3O95164 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.99■□□□□ 0.79
UBL3O95164 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBL3O95164 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBL3O95164 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UBL3O95164 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.98■□□□□ 0.79
UBL3O95164 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBL3O95164 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
UBL3O95164 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBL3O95164 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBL3O95164 AC010997.5-201ENST00000609182 354 ntBASIC19.98■□□□□ 0.79
UBL3O95164 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBL3O95164 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.98■□□□□ 0.79
UBL3O95164 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBL3O95164 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBL3O95164 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBL3O95164 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBL3O95164 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBL3O95164 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBL3O95164 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBL3O95164 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.97■□□□□ 0.79
UBL3O95164 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBL3O95164 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.97■□□□□ 0.79
UBL3O95164 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
UBL3O95164 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
UBL3O95164 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
UBL3O95164 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBL3O95164 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBL3O95164 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBL3O95164 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBL3O95164 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBL3O95164 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBL3O95164 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBL3O95164 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.96■□□□□ 0.79
UBL3O95164 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBL3O95164 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBL3O95164 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBL3O95164 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
UBL3O95164 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBL3O95164 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBL3O95164 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBL3O95164 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
UBL3O95164 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.96■□□□□ 0.79
UBL3O95164 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.96■□□□□ 0.79
UBL3O95164 ALDH1A3-203ENST00000557963 1670 ntBASIC19.96■□□□□ 0.79
UBL3O95164 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBL3O95164 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.96■□□□□ 0.79
UBL3O95164 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBL3O95164 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBL3O95164 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBL3O95164 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
UBL3O95164 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.96■□□□□ 0.79
UBL3O95164 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
UBL3O95164 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
UBL3O95164 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBL3O95164 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBL3O95164 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
UBL3O95164 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBL3O95164 LINC00526-201ENST00000581067 1875 ntBASIC19.95■□□□□ 0.78
UBL3O95164 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBL3O95164 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBL3O95164 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBL3O95164 KRT16P3-201ENST00000439127 1283 ntBASIC19.95■□□□□ 0.78
UBL3O95164 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.95■□□□□ 0.78
UBL3O95164 UNC93B8-201ENST00000511903 705 ntBASIC19.95■□□□□ 0.78
UBL3O95164 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.95■□□□□ 0.78
UBL3O95164 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.95■□□□□ 0.78
UBL3O95164 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
UBL3O95164 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.95■□□□□ 0.78
UBL3O95164 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
UBL3O95164 AC127496.7-201ENST00000625110 1798 ntBASIC19.95■□□□□ 0.78
UBL3O95164 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBL3O95164 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.95■□□□□ 0.78
UBL3O95164 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms