Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.06■■□□□ 1.76
CDKL5O76039 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CDKL5O76039 AL353803.4-201ENST00000565882 1934 ntBASIC26.06■■□□□ 1.76
CDKL5O76039 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CDKL5O76039 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.06■■□□□ 1.76
CDKL5O76039 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
CDKL5O76039 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDKL5O76039 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC26.06■■□□□ 1.76
CDKL5O76039 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CDKL5O76039 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CDKL5O76039 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.05■■□□□ 1.76
CDKL5O76039 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.05■■□□□ 1.76
CDKL5O76039 AC012676.1-201ENST00000574705 1949 ntBASIC26.05■■□□□ 1.76
CDKL5O76039 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CDKL5O76039 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.04■■□□□ 1.76
CDKL5O76039 AC009102.2-201ENST00000606772 1639 ntBASIC26.04■■□□□ 1.76
CDKL5O76039 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDKL5O76039 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDKL5O76039 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.04■■□□□ 1.76
CDKL5O76039 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.04■■□□□ 1.76
CDKL5O76039 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.04■■□□□ 1.76
CDKL5O76039 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26.04■■□□□ 1.76
CDKL5O76039 FP325331.1-202ENST00000623531 1380 ntBASIC26.04■■□□□ 1.76
CDKL5O76039 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDKL5O76039 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC26.03■■□□□ 1.76
CDKL5O76039 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDKL5O76039 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDKL5O76039 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.03■■□□□ 1.76
CDKL5O76039 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDKL5O76039 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.03■■□□□ 1.76
CDKL5O76039 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDKL5O76039 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CDKL5O76039 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
CDKL5O76039 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC26.02■■□□□ 1.76
CDKL5O76039 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDKL5O76039 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDKL5O76039 C9orf163-202ENST00000624034 2573 ntBASIC26.02■■□□□ 1.76
CDKL5O76039 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDKL5O76039 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.02■■□□□ 1.76
CDKL5O76039 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.02■■□□□ 1.76
CDKL5O76039 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDKL5O76039 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDKL5O76039 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.01■■□□□ 1.76
CDKL5O76039 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CDKL5O76039 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
CDKL5O76039 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CDKL5O76039 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.01■■□□□ 1.75
CDKL5O76039 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CDKL5O76039 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
CDKL5O76039 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.01■■□□□ 1.75
CDKL5O76039 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.01■■□□□ 1.75
CDKL5O76039 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.01■■□□□ 1.75
CDKL5O76039 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.01■■□□□ 1.75
CDKL5O76039 LINC01529-204ENST00000636474 1715 ntBASIC26.01■■□□□ 1.75
CDKL5O76039 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.01■■□□□ 1.75
CDKL5O76039 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC26.01■■□□□ 1.75
CDKL5O76039 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CDKL5O76039 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26■■□□□ 1.75
CDKL5O76039 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26■■□□□ 1.75
CDKL5O76039 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CDKL5O76039 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
CDKL5O76039 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26■■□□□ 1.75
CDKL5O76039 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CDKL5O76039 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26■■□□□ 1.75
CDKL5O76039 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26■■□□□ 1.75
CDKL5O76039 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
CDKL5O76039 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CDKL5O76039 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.99■■□□□ 1.75
CDKL5O76039 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
CDKL5O76039 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.99■■□□□ 1.75
CDKL5O76039 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC25.99■■□□□ 1.75
CDKL5O76039 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
CDKL5O76039 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CDKL5O76039 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.99■■□□□ 1.75
CDKL5O76039 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CDKL5O76039 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CDKL5O76039 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
CDKL5O76039 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.98■■□□□ 1.75
CDKL5O76039 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.98■■□□□ 1.75
CDKL5O76039 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.98■■□□□ 1.75
CDKL5O76039 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CDKL5O76039 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CDKL5O76039 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC25.97■■□□□ 1.75
CDKL5O76039 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CDKL5O76039 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.97■■□□□ 1.75
CDKL5O76039 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.97■■□□□ 1.75
CDKL5O76039 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.97■■□□□ 1.75
CDKL5O76039 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CDKL5O76039 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CDKL5O76039 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CDKL5O76039 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.96■■□□□ 1.75
CDKL5O76039 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CDKL5O76039 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CDKL5O76039 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CDKL5O76039 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.96■■□□□ 1.75
CDKL5O76039 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.96■■□□□ 1.75
CDKL5O76039 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
CDKL5O76039 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.96■■□□□ 1.75
CDKL5O76039 C17orf82-201ENST00000623772 1530 ntBASIC25.96■■□□□ 1.75
CDKL5O76039 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.96■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms