Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CLPXO76031 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLPXO76031 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.26■□□□□ 0.83
CLPXO76031 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.26■□□□□ 0.83
CLPXO76031 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLPXO76031 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.26■□□□□ 0.83
CLPXO76031 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLPXO76031 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.26■□□□□ 0.83
CLPXO76031 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLPXO76031 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CLPXO76031 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLPXO76031 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLPXO76031 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLPXO76031 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CLPXO76031 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CLPXO76031 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLPXO76031 AC026310.3-201ENST00000625186 2373 ntBASIC20.26■□□□□ 0.83
CLPXO76031 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CLPXO76031 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLPXO76031 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLPXO76031 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CLPXO76031 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.25■□□□□ 0.83
CLPXO76031 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLPXO76031 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CLPXO76031 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CLPXO76031 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLPXO76031 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CLPXO76031 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLPXO76031 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLPXO76031 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.24■□□□□ 0.83
CLPXO76031 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CLPXO76031 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLPXO76031 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLPXO76031 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLPXO76031 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLPXO76031 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.24■□□□□ 0.83
CLPXO76031 AC060814.1-201ENST00000554326 538 ntBASIC20.24■□□□□ 0.83
CLPXO76031 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLPXO76031 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLPXO76031 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.24■□□□□ 0.83
CLPXO76031 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CLPXO76031 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLPXO76031 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLPXO76031 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CLPXO76031 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLPXO76031 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.23■□□□□ 0.83
CLPXO76031 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.23■□□□□ 0.83
CLPXO76031 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLPXO76031 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CLPXO76031 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.23■□□□□ 0.83
CLPXO76031 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.23■□□□□ 0.83
CLPXO76031 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.23■□□□□ 0.83
CLPXO76031 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLPXO76031 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLPXO76031 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLPXO76031 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLPXO76031 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLPXO76031 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.22■□□□□ 0.83
CLPXO76031 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CLPXO76031 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLPXO76031 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CLPXO76031 AC092053.2-201ENST00000640557 1818 ntBASIC20.22■□□□□ 0.83
CLPXO76031 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.22■□□□□ 0.83
CLPXO76031 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLPXO76031 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CLPXO76031 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLPXO76031 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLPXO76031 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLPXO76031 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLPXO76031 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLPXO76031 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLPXO76031 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLPXO76031 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.21■□□□□ 0.83
CLPXO76031 AC022413.1-201ENST00000624602 984 ntBASIC20.21■□□□□ 0.83
CLPXO76031 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.21■□□□□ 0.83
CLPXO76031 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLPXO76031 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.21■□□□□ 0.83
CLPXO76031 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.21■□□□□ 0.83
CLPXO76031 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CLPXO76031 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CLPXO76031 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLPXO76031 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLPXO76031 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.21■□□□□ 0.83
CLPXO76031 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLPXO76031 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.83
CLPXO76031 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CLPXO76031 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLPXO76031 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLPXO76031 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLPXO76031 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLPXO76031 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CLPXO76031 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CLPXO76031 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLPXO76031 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLPXO76031 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLPXO76031 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.2■□□□□ 0.82
CLPXO76031 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLPXO76031 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLPXO76031 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLPXO76031 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms