Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.16■□□□□ 0.98
RRP8O43159 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RRP8O43159 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RRP8O43159 AL355802.2-201ENST00000402069 882 ntBASIC21.16■□□□□ 0.98
RRP8O43159 CDCA4P2-201ENST00000441182 718 ntBASIC21.16■□□□□ 0.98
RRP8O43159 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.16■□□□□ 0.98
RRP8O43159 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.16■□□□□ 0.98
RRP8O43159 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RRP8O43159 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RRP8O43159 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RRP8O43159 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RRP8O43159 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RRP8O43159 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
RRP8O43159 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.15■□□□□ 0.98
RRP8O43159 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.15■□□□□ 0.98
RRP8O43159 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.15■□□□□ 0.98
RRP8O43159 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RRP8O43159 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.15■□□□□ 0.98
RRP8O43159 RAP2CP1-201ENST00000605103 478 ntBASIC21.15■□□□□ 0.98
RRP8O43159 AC091060.1-201ENST00000623524 1766 ntBASIC21.15■□□□□ 0.98
RRP8O43159 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RRP8O43159 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RRP8O43159 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.14■□□□□ 0.98
RRP8O43159 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RRP8O43159 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.14■□□□□ 0.97
RRP8O43159 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RRP8O43159 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.14■□□□□ 0.97
RRP8O43159 AL109923.1-201ENST00000618799 583 ntBASIC21.14■□□□□ 0.97
RRP8O43159 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.14■□□□□ 0.97
RRP8O43159 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
RRP8O43159 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RRP8O43159 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RRP8O43159 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RRP8O43159 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RRP8O43159 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RRP8O43159 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RRP8O43159 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.13■□□□□ 0.97
RRP8O43159 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RRP8O43159 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.13■□□□□ 0.97
RRP8O43159 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
RRP8O43159 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RRP8O43159 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RRP8O43159 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.13■□□□□ 0.97
RRP8O43159 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RRP8O43159 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RRP8O43159 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
RRP8O43159 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.12■□□□□ 0.97
RRP8O43159 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RRP8O43159 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RRP8O43159 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.12■□□□□ 0.97
RRP8O43159 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.12■□□□□ 0.97
RRP8O43159 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.12■□□□□ 0.97
RRP8O43159 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.12■□□□□ 0.97
RRP8O43159 BID-214ENST00000617586 542 ntTSL 5 BASIC21.12■□□□□ 0.97
RRP8O43159 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RRP8O43159 ERN1-208ENST00000606895 2068 ntBASIC21.12■□□□□ 0.97
RRP8O43159 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RRP8O43159 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RRP8O43159 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RRP8O43159 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.11■□□□□ 0.97
RRP8O43159 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.11■□□□□ 0.97
RRP8O43159 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RRP8O43159 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RRP8O43159 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RRP8O43159 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RRP8O43159 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RRP8O43159 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RRP8O43159 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.1■□□□□ 0.97
RRP8O43159 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RRP8O43159 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.1■□□□□ 0.97
RRP8O43159 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.1■□□□□ 0.97
RRP8O43159 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.1■□□□□ 0.97
RRP8O43159 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.1■□□□□ 0.97
RRP8O43159 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RRP8O43159 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RRP8O43159 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.1■□□□□ 0.97
RRP8O43159 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RRP8O43159 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RRP8O43159 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.09■□□□□ 0.97
RRP8O43159 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RRP8O43159 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RRP8O43159 AC133637.1-201ENST00000624115 1537 ntBASIC21.09■□□□□ 0.97
RRP8O43159 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RRP8O43159 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RRP8O43159 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.09■□□□□ 0.97
RRP8O43159 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.09■□□□□ 0.97
RRP8O43159 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.09■□□□□ 0.97
RRP8O43159 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RRP8O43159 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RRP8O43159 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.08■□□□□ 0.97
RRP8O43159 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.08■□□□□ 0.97
RRP8O43159 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RRP8O43159 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RRP8O43159 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RRP8O43159 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
RRP8O43159 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.08■□□□□ 0.97
RRP8O43159 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.08■□□□□ 0.97
RRP8O43159 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.08■□□□□ 0.97
RRP8O43159 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.08■□□□□ 0.97
RRP8O43159 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms