Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SHOXO15266 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHOXO15266 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHOXO15266 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.01■□□□□ 0.63
SHOXO15266 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SHOXO15266 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.01■□□□□ 0.63
SHOXO15266 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHOXO15266 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHOXO15266 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHOXO15266 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.01■□□□□ 0.63
SHOXO15266 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHOXO15266 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHOXO15266 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHOXO15266 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SHOXO15266 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHOXO15266 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHOXO15266 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19■□□□□ 0.63
SHOXO15266 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHOXO15266 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHOXO15266 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHOXO15266 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19■□□□□ 0.63
SHOXO15266 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHOXO15266 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHOXO15266 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHOXO15266 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19■□□□□ 0.63
SHOXO15266 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHOXO15266 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHOXO15266 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHOXO15266 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHOXO15266 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHOXO15266 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
SHOXO15266 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.99■□□□□ 0.63
SHOXO15266 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.99■□□□□ 0.63
SHOXO15266 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHOXO15266 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHOXO15266 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHOXO15266 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.99■□□□□ 0.63
SHOXO15266 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHOXO15266 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHOXO15266 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHOXO15266 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.98■□□□□ 0.63
SHOXO15266 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHOXO15266 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.98■□□□□ 0.63
SHOXO15266 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.98■□□□□ 0.63
SHOXO15266 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.98■□□□□ 0.63
SHOXO15266 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.98■□□□□ 0.63
SHOXO15266 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SHOXO15266 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHOXO15266 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHOXO15266 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHOXO15266 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.98■□□□□ 0.63
SHOXO15266 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHOXO15266 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHOXO15266 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
SHOXO15266 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.97■□□□□ 0.63
SHOXO15266 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHOXO15266 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SHOXO15266 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHOXO15266 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHOXO15266 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SHOXO15266 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.97■□□□□ 0.63
SHOXO15266 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.97■□□□□ 0.63
SHOXO15266 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHOXO15266 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHOXO15266 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.96■□□□□ 0.63
SHOXO15266 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.96■□□□□ 0.63
SHOXO15266 AC004812.2-201ENST00000611079 2094 ntBASIC18.96■□□□□ 0.63
SHOXO15266 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.96■□□□□ 0.63
SHOXO15266 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SHOXO15266 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHOXO15266 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHOXO15266 AC018755.3-202ENST00000596210 929 ntBASIC18.96■□□□□ 0.63
SHOXO15266 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SHOXO15266 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.96■□□□□ 0.63
SHOXO15266 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SHOXO15266 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHOXO15266 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHOXO15266 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHOXO15266 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SHOXO15266 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SHOXO15266 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHOXO15266 RARRES2P2-201ENST00000394842 485 ntBASIC18.95■□□□□ 0.62
SHOXO15266 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHOXO15266 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.95■□□□□ 0.62
SHOXO15266 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.95■□□□□ 0.62
SHOXO15266 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SHOXO15266 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHOXO15266 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHOXO15266 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHOXO15266 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SHOXO15266 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHOXO15266 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHOXO15266 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHOXO15266 AL592293.1-201ENST00000502889 1188 ntBASIC18.94■□□□□ 0.62
SHOXO15266 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.94■□□□□ 0.62
SHOXO15266 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.94■□□□□ 0.62
SHOXO15266 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.94■□□□□ 0.62
SHOXO15266 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHOXO15266 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SHOXO15266 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms