Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA4O00483 AC009102.2-201ENST00000606772 1639 ntBASIC17.19■□□□□ 0.34
NDUFA4O00483 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA4O00483 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA4O00483 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.19■□□□□ 0.34
NDUFA4O00483 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.19■□□□□ 0.34
NDUFA4O00483 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.19■□□□□ 0.34
NDUFA4O00483 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA4O00483 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.19■□□□□ 0.34
NDUFA4O00483 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA4O00483 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA4O00483 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
NDUFA4O00483 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA4O00483 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
NDUFA4O00483 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.19■□□□□ 0.34
NDUFA4O00483 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
NDUFA4O00483 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.18■□□□□ 0.34
NDUFA4O00483 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFA4O00483 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFA4O00483 AL353803.4-201ENST00000565882 1934 ntBASIC17.18■□□□□ 0.34
NDUFA4O00483 AL356740.2-201ENST00000601559 647 ntBASIC17.18■□□□□ 0.34
NDUFA4O00483 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.18■□□□□ 0.34
NDUFA4O00483 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.18■□□□□ 0.34
NDUFA4O00483 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFA4O00483 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.18■□□□□ 0.34
NDUFA4O00483 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
NDUFA4O00483 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.18■□□□□ 0.34
NDUFA4O00483 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFA4O00483 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFA4O00483 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA4O00483 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA4O00483 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.17■□□□□ 0.34
NDUFA4O00483 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA4O00483 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.17■□□□□ 0.34
NDUFA4O00483 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA4O00483 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA4O00483 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA4O00483 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.17■□□□□ 0.34
NDUFA4O00483 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA4O00483 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
NDUFA4O00483 LINC01529-204ENST00000636474 1715 ntBASIC17.17■□□□□ 0.34
NDUFA4O00483 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA4O00483 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA4O00483 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.17■□□□□ 0.34
NDUFA4O00483 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA4O00483 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NDUFA4O00483 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA4O00483 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA4O00483 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.16■□□□□ 0.34
NDUFA4O00483 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA4O00483 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NDUFA4O00483 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NDUFA4O00483 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA4O00483 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA4O00483 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA4O00483 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.16■□□□□ 0.34
NDUFA4O00483 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.16■□□□□ 0.34
NDUFA4O00483 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
NDUFA4O00483 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.15■□□□□ 0.34
NDUFA4O00483 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA4O00483 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
NDUFA4O00483 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.15■□□□□ 0.34
NDUFA4O00483 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
NDUFA4O00483 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.15■□□□□ 0.34
NDUFA4O00483 AL117332.1-201ENST00000622628 974 ntBASIC17.15■□□□□ 0.34
NDUFA4O00483 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA4O00483 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
NDUFA4O00483 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NDUFA4O00483 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.14■□□□□ 0.33
NDUFA4O00483 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA4O00483 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA4O00483 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA4O00483 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA4O00483 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NDUFA4O00483 AL356441.2-201ENST00000443009 864 ntBASIC17.14■□□□□ 0.33
NDUFA4O00483 C17orf82-201ENST00000623772 1530 ntBASIC17.14■□□□□ 0.33
NDUFA4O00483 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.14■□□□□ 0.33
NDUFA4O00483 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.14■□□□□ 0.33
NDUFA4O00483 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA4O00483 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
NDUFA4O00483 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.14■□□□□ 0.33
NDUFA4O00483 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA4O00483 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA4O00483 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA4O00483 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.13■□□□□ 0.33
NDUFA4O00483 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.13■□□□□ 0.33
NDUFA4O00483 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA4O00483 DUX4L4-201ENST00000566884 1269 ntBASIC17.13■□□□□ 0.33
NDUFA4O00483 MIR3621-201ENST00000580529 85 ntBASIC17.13■□□□□ 0.33
NDUFA4O00483 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.13■□□□□ 0.33
NDUFA4O00483 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA4O00483 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NDUFA4O00483 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA4O00483 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA4O00483 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.12■□□□□ 0.33
NDUFA4O00483 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA4O00483 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA4O00483 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.12■□□□□ 0.33
NDUFA4O00483 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA4O00483 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms