Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.38■■□□□ 1.01
RTCAO00442 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.37■■□□□ 1.01
RTCAO00442 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTCAO00442 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTCAO00442 AC009102.2-201ENST00000606772 1639 ntBASIC21.37■■□□□ 1.01
RTCAO00442 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RTCAO00442 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.37■■□□□ 1.01
RTCAO00442 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTCAO00442 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.37■■□□□ 1.01
RTCAO00442 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTCAO00442 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RTCAO00442 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RTCAO00442 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.37■■□□□ 1.01
RTCAO00442 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RTCAO00442 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTCAO00442 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTCAO00442 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTCAO00442 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.36■■□□□ 1.01
RTCAO00442 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RTCAO00442 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTCAO00442 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTCAO00442 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.36■■□□□ 1.01
RTCAO00442 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RTCAO00442 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTCAO00442 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RTCAO00442 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RTCAO00442 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.35■■□□□ 1.01
RTCAO00442 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTCAO00442 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
RTCAO00442 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.35■■□□□ 1.01
RTCAO00442 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.35■■□□□ 1.01
RTCAO00442 AL117332.1-201ENST00000622628 974 ntBASIC21.35■■□□□ 1.01
RTCAO00442 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RTCAO00442 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
RTCAO00442 AL353803.4-201ENST00000565882 1934 ntBASIC21.35■■□□□ 1.01
RTCAO00442 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTCAO00442 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RTCAO00442 AC133561.1-201ENST00000568600 2415 ntBASIC21.34■■□□□ 1.01
RTCAO00442 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RTCAO00442 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RTCAO00442 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.34■■□□□ 1.01
RTCAO00442 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RTCAO00442 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTCAO00442 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTCAO00442 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTCAO00442 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
RTCAO00442 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTCAO00442 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTCAO00442 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTCAO00442 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTCAO00442 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.33■■□□□ 1.01
RTCAO00442 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.33■■□□□ 1.01
RTCAO00442 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.33■■□□□ 1.01
RTCAO00442 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.33■■□□□ 1
RTCAO00442 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
RTCAO00442 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
RTCAO00442 AC144652.1-201ENST00000609974 1624 ntBASIC21.33■■□□□ 1
RTCAO00442 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RTCAO00442 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.32■■□□□ 1
RTCAO00442 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.32■■□□□ 1
RTCAO00442 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.32■■□□□ 1
RTCAO00442 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RTCAO00442 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.32■■□□□ 1
RTCAO00442 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTCAO00442 AC068473.5-201ENST00000616428 2072 ntBASIC21.32■■□□□ 1
RTCAO00442 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RTCAO00442 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.32■■□□□ 1
RTCAO00442 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTCAO00442 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.31■■□□□ 1
RTCAO00442 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.31■■□□□ 1
RTCAO00442 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.31■■□□□ 1
RTCAO00442 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.31■■□□□ 1
RTCAO00442 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.31■■□□□ 1
RTCAO00442 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTCAO00442 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.31■■□□□ 1
RTCAO00442 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.31■■□□□ 1
RTCAO00442 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.31■■□□□ 1
RTCAO00442 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTCAO00442 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTCAO00442 MIR3621-201ENST00000580529 85 ntBASIC21.3■■□□□ 1
RTCAO00442 AL356740.2-201ENST00000601559 647 ntBASIC21.3■■□□□ 1
RTCAO00442 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.3■■□□□ 1
RTCAO00442 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.3■■□□□ 1
RTCAO00442 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.3■■□□□ 1
RTCAO00442 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.3■■□□□ 1
RTCAO00442 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.3■■□□□ 1
RTCAO00442 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTCAO00442 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RTCAO00442 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.29■■□□□ 1
RTCAO00442 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.29■■□□□ 1
RTCAO00442 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.29■■□□□ 1
RTCAO00442 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.29■■□□□ 1
RTCAO00442 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.29■■□□□ 1
RTCAO00442 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTCAO00442 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.29■■□□□ 1
RTCAO00442 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.29■■□□□ 1
RTCAO00442 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.29■■□□□ 1
RTCAO00442 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RTCAO00442 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RTCAO00442 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms