Protein–RNA interactions for Protein: A6NFQ2

TCAF2, TRPM8 channel-associated factor 2, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF2A6NFQ2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.07■■□□□ 1.28
TCAF2A6NFQ2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TCAF2A6NFQ2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.07■■□□□ 1.28
TCAF2A6NFQ2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
TCAF2A6NFQ2 AL136162.1-201ENST00000607711 1078 ntBASIC23.07■■□□□ 1.28
TCAF2A6NFQ2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TCAF2A6NFQ2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
TCAF2A6NFQ2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TCAF2A6NFQ2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.07■■□□□ 1.28
TCAF2A6NFQ2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TCAF2A6NFQ2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.07■■□□□ 1.28
TCAF2A6NFQ2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
TCAF2A6NFQ2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TCAF2A6NFQ2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TCAF2A6NFQ2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TCAF2A6NFQ2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TCAF2A6NFQ2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.06■■□□□ 1.28
TCAF2A6NFQ2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
TCAF2A6NFQ2 AC006455.2-201ENST00000429931 906 ntBASIC23.06■■□□□ 1.28
TCAF2A6NFQ2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.06■■□□□ 1.28
TCAF2A6NFQ2 AC106739.1-201ENST00000617035 715 ntBASIC23.06■■□□□ 1.28
TCAF2A6NFQ2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.06■■□□□ 1.28
TCAF2A6NFQ2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TCAF2A6NFQ2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.06■■□□□ 1.28
TCAF2A6NFQ2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TCAF2A6NFQ2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
TCAF2A6NFQ2 AC144652.1-201ENST00000609974 1624 ntBASIC23.05■■□□□ 1.28
TCAF2A6NFQ2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TCAF2A6NFQ2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
TCAF2A6NFQ2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
TCAF2A6NFQ2 MIR638-201ENST00000385237 100 ntBASIC23.05■■□□□ 1.28
TCAF2A6NFQ2 SERBP1P1-201ENST00000396021 1160 ntBASIC23.05■■□□□ 1.28
TCAF2A6NFQ2 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.05■■□□□ 1.28
TCAF2A6NFQ2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TCAF2A6NFQ2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TCAF2A6NFQ2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TCAF2A6NFQ2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TCAF2A6NFQ2 AC135279.3-201ENST00000610945 1311 ntBASIC23.05■■□□□ 1.28
TCAF2A6NFQ2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TCAF2A6NFQ2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TCAF2A6NFQ2 FP325331.1-202ENST00000623531 1380 ntBASIC23.04■■□□□ 1.28
TCAF2A6NFQ2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.04■■□□□ 1.28
TCAF2A6NFQ2 PBX2P1-201ENST00000493219 1291 ntBASIC23.04■■□□□ 1.28
TCAF2A6NFQ2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TCAF2A6NFQ2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.04■■□□□ 1.28
TCAF2A6NFQ2 AL138724.1-201ENST00000606771 1088 ntBASIC23.04■■□□□ 1.28
TCAF2A6NFQ2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.04■■□□□ 1.28
TCAF2A6NFQ2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.04■■□□□ 1.28
TCAF2A6NFQ2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TCAF2A6NFQ2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
TCAF2A6NFQ2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TCAF2A6NFQ2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.04■■□□□ 1.28
TCAF2A6NFQ2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TCAF2A6NFQ2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.03■■□□□ 1.28
TCAF2A6NFQ2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
TCAF2A6NFQ2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TCAF2A6NFQ2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TCAF2A6NFQ2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TCAF2A6NFQ2 AC024257.2-201ENST00000549699 147 ntBASIC23.03■■□□□ 1.28
TCAF2A6NFQ2 AC133561.4-201ENST00000566112 224 ntBASIC23.03■■□□□ 1.28
TCAF2A6NFQ2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TCAF2A6NFQ2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.03■■□□□ 1.28
TCAF2A6NFQ2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
TCAF2A6NFQ2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TCAF2A6NFQ2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TCAF2A6NFQ2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TCAF2A6NFQ2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.02■■□□□ 1.28
TCAF2A6NFQ2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TCAF2A6NFQ2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TCAF2A6NFQ2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TCAF2A6NFQ2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TCAF2A6NFQ2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TCAF2A6NFQ2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TCAF2A6NFQ2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TCAF2A6NFQ2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
TCAF2A6NFQ2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TCAF2A6NFQ2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
TCAF2A6NFQ2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TCAF2A6NFQ2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.01■■□□□ 1.27
TCAF2A6NFQ2 AC011298.3-201ENST00000615796 283 ntBASIC23.01■■□□□ 1.27
TCAF2A6NFQ2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.01■■□□□ 1.27
TCAF2A6NFQ2 AC133561.1-201ENST00000568600 2415 ntBASIC23.01■■□□□ 1.27
TCAF2A6NFQ2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TCAF2A6NFQ2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
TCAF2A6NFQ2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23■■□□□ 1.27
TCAF2A6NFQ2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
TCAF2A6NFQ2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23■■□□□ 1.27
TCAF2A6NFQ2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TCAF2A6NFQ2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23■■□□□ 1.27
TCAF2A6NFQ2 DUX4L4-201ENST00000566884 1269 ntBASIC23■■□□□ 1.27
TCAF2A6NFQ2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TCAF2A6NFQ2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23■■□□□ 1.27
TCAF2A6NFQ2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TCAF2A6NFQ2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23■■□□□ 1.27
TCAF2A6NFQ2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23■■□□□ 1.27
TCAF2A6NFQ2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.99■■□□□ 1.27
TCAF2A6NFQ2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.99■■□□□ 1.27
TCAF2A6NFQ2 MIR3181-201ENST00000578512 73 ntBASIC22.99■■□□□ 1.27
TCAF2A6NFQ2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TCAF2A6NFQ2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms