Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHISA3A0PJX4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHISA3A0PJX4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHISA3A0PJX4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHISA3A0PJX4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SHISA3A0PJX4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SHISA3A0PJX4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SHISA3A0PJX4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SHISA3A0PJX4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.62■□□□□ 0.73
SHISA3A0PJX4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.62■□□□□ 0.73
SHISA3A0PJX4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHISA3A0PJX4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.62■□□□□ 0.73
SHISA3A0PJX4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
SHISA3A0PJX4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SHISA3A0PJX4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHISA3A0PJX4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHISA3A0PJX4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHISA3A0PJX4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SHISA3A0PJX4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHISA3A0PJX4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHISA3A0PJX4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHISA3A0PJX4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHISA3A0PJX4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHISA3A0PJX4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHISA3A0PJX4 AC026310.3-201ENST00000625186 2373 ntBASIC19.61■□□□□ 0.73
SHISA3A0PJX4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.6■□□□□ 0.73
SHISA3A0PJX4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHISA3A0PJX4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHISA3A0PJX4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
SHISA3A0PJX4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHISA3A0PJX4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.6■□□□□ 0.73
SHISA3A0PJX4 RPS2P7-201ENST00000447334 885 ntBASIC19.6■□□□□ 0.73
SHISA3A0PJX4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.6■□□□□ 0.73
SHISA3A0PJX4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHISA3A0PJX4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.6■□□□□ 0.73
SHISA3A0PJX4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SHISA3A0PJX4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHISA3A0PJX4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.6■□□□□ 0.73
SHISA3A0PJX4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHISA3A0PJX4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHISA3A0PJX4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHISA3A0PJX4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SHISA3A0PJX4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHISA3A0PJX4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.59■□□□□ 0.73
SHISA3A0PJX4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHISA3A0PJX4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SHISA3A0PJX4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHISA3A0PJX4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SHISA3A0PJX4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.59■□□□□ 0.73
SHISA3A0PJX4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.59■□□□□ 0.73
SHISA3A0PJX4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHISA3A0PJX4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHISA3A0PJX4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHISA3A0PJX4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHISA3A0PJX4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SHISA3A0PJX4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SHISA3A0PJX4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHISA3A0PJX4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SHISA3A0PJX4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHISA3A0PJX4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHISA3A0PJX4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
SHISA3A0PJX4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHISA3A0PJX4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
SHISA3A0PJX4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SHISA3A0PJX4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHISA3A0PJX4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHISA3A0PJX4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHISA3A0PJX4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHISA3A0PJX4 AC009831.1-201ENST00000580420 1582 ntBASIC19.57■□□□□ 0.72
SHISA3A0PJX4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHISA3A0PJX4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHISA3A0PJX4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHISA3A0PJX4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHISA3A0PJX4 AL592295.1-201ENST00000400984 884 ntBASIC19.56■□□□□ 0.72
SHISA3A0PJX4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.56■□□□□ 0.72
SHISA3A0PJX4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.56■□□□□ 0.72
SHISA3A0PJX4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHISA3A0PJX4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.56■□□□□ 0.72
SHISA3A0PJX4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.56■□□□□ 0.72
SHISA3A0PJX4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHISA3A0PJX4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHISA3A0PJX4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.56■□□□□ 0.72
SHISA3A0PJX4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SHISA3A0PJX4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHISA3A0PJX4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHISA3A0PJX4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHISA3A0PJX4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHISA3A0PJX4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.55■□□□□ 0.72
SHISA3A0PJX4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.55■□□□□ 0.72
SHISA3A0PJX4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHISA3A0PJX4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.55■□□□□ 0.72
SHISA3A0PJX4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms