Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DUXBA0A1W2PPF3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DUXBA0A1W2PPF3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DUXBA0A1W2PPF3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DUXBA0A1W2PPF3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DUXBA0A1W2PPF3 AC079630.1-202ENST00000618127 1840 ntBASIC18.29■□□□□ 0.52
DUXBA0A1W2PPF3 AC133552.2-201ENST00000619106 1032 ntBASIC18.29■□□□□ 0.52
DUXBA0A1W2PPF3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
DUXBA0A1W2PPF3 AC139530.1-201ENST00000575312 1977 ntBASIC18.29■□□□□ 0.52
DUXBA0A1W2PPF3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DUXBA0A1W2PPF3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DUXBA0A1W2PPF3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DUXBA0A1W2PPF3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DUXBA0A1W2PPF3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.29■□□□□ 0.52
DUXBA0A1W2PPF3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DUXBA0A1W2PPF3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DUXBA0A1W2PPF3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.28■□□□□ 0.52
DUXBA0A1W2PPF3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DUXBA0A1W2PPF3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
DUXBA0A1W2PPF3 AC007375.3-201ENST00000600936 2314 ntBASIC18.28■□□□□ 0.52
DUXBA0A1W2PPF3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DUXBA0A1W2PPF3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.28■□□□□ 0.52
DUXBA0A1W2PPF3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DUXBA0A1W2PPF3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DUXBA0A1W2PPF3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
DUXBA0A1W2PPF3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.28■□□□□ 0.52
DUXBA0A1W2PPF3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.28■□□□□ 0.52
DUXBA0A1W2PPF3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DUXBA0A1W2PPF3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DUXBA0A1W2PPF3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DUXBA0A1W2PPF3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DUXBA0A1W2PPF3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.27■□□□□ 0.52
DUXBA0A1W2PPF3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DUXBA0A1W2PPF3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
DUXBA0A1W2PPF3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DUXBA0A1W2PPF3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
DUXBA0A1W2PPF3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DUXBA0A1W2PPF3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
DUXBA0A1W2PPF3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.27■□□□□ 0.52
DUXBA0A1W2PPF3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DUXBA0A1W2PPF3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
DUXBA0A1W2PPF3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.27■□□□□ 0.51
DUXBA0A1W2PPF3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
DUXBA0A1W2PPF3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
DUXBA0A1W2PPF3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
DUXBA0A1W2PPF3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
DUXBA0A1W2PPF3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
DUXBA0A1W2PPF3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.27■□□□□ 0.51
DUXBA0A1W2PPF3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.26■□□□□ 0.51
DUXBA0A1W2PPF3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
DUXBA0A1W2PPF3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
DUXBA0A1W2PPF3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
DUXBA0A1W2PPF3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DUXBA0A1W2PPF3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DUXBA0A1W2PPF3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DUXBA0A1W2PPF3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DUXBA0A1W2PPF3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DUXBA0A1W2PPF3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
DUXBA0A1W2PPF3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.26■□□□□ 0.51
DUXBA0A1W2PPF3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DUXBA0A1W2PPF3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DUXBA0A1W2PPF3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
DUXBA0A1W2PPF3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DUXBA0A1W2PPF3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
DUXBA0A1W2PPF3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
DUXBA0A1W2PPF3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DUXBA0A1W2PPF3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.25■□□□□ 0.51
DUXBA0A1W2PPF3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
DUXBA0A1W2PPF3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.25■□□□□ 0.51
DUXBA0A1W2PPF3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.25■□□□□ 0.51
DUXBA0A1W2PPF3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
DUXBA0A1W2PPF3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
DUXBA0A1W2PPF3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DUXBA0A1W2PPF3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
DUXBA0A1W2PPF3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
DUXBA0A1W2PPF3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
DUXBA0A1W2PPF3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DUXBA0A1W2PPF3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.25■□□□□ 0.51
DUXBA0A1W2PPF3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DUXBA0A1W2PPF3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DUXBA0A1W2PPF3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.25■□□□□ 0.51
DUXBA0A1W2PPF3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DUXBA0A1W2PPF3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.24■□□□□ 0.51
DUXBA0A1W2PPF3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
DUXBA0A1W2PPF3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.24■□□□□ 0.51
DUXBA0A1W2PPF3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DUXBA0A1W2PPF3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DUXBA0A1W2PPF3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
DUXBA0A1W2PPF3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUXBA0A1W2PPF3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUXBA0A1W2PPF3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUXBA0A1W2PPF3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUXBA0A1W2PPF3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUXBA0A1W2PPF3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUXBA0A1W2PPF3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
DUXBA0A1W2PPF3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUXBA0A1W2PPF3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DUXBA0A1W2PPF3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.23■□□□□ 0.51
DUXBA0A1W2PPF3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUXBA0A1W2PPF3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms