Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV10-1A0A0K0K1A3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV10-1A0A0K0K1A3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV10-1A0A0K0K1A3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV10-1A0A0K0K1A3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV10-1A0A0K0K1A3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV10-1A0A0K0K1A3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV10-1A0A0K0K1A3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV10-1A0A0K0K1A3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV10-1A0A0K0K1A3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.79■□□□□ 0.12
TRBV10-1A0A0K0K1A3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
TRBV10-1A0A0K0K1A3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
TRBV10-1A0A0K0K1A3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC15.79■□□□□ 0.12
TRBV10-1A0A0K0K1A3 AC103834.1-201ENST00000520383 144 ntBASIC15.79■□□□□ 0.12
TRBV10-1A0A0K0K1A3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC15.79■□□□□ 0.12
TRBV10-1A0A0K0K1A3 AC103724.3-201ENST00000564481 992 ntBASIC15.79■□□□□ 0.12
TRBV10-1A0A0K0K1A3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV10-1A0A0K0K1A3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV10-1A0A0K0K1A3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV10-1A0A0K0K1A3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV10-1A0A0K0K1A3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC15.79■□□□□ 0.12
TRBV10-1A0A0K0K1A3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV10-1A0A0K0K1A3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV10-1A0A0K0K1A3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV10-1A0A0K0K1A3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV10-1A0A0K0K1A3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV10-1A0A0K0K1A3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV10-1A0A0K0K1A3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV10-1A0A0K0K1A3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRBV10-1A0A0K0K1A3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRBV10-1A0A0K0K1A3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.78■□□□□ 0.12
TRBV10-1A0A0K0K1A3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV10-1A0A0K0K1A3 AL033527.3-201ENST00000566366 1196 ntBASIC15.78■□□□□ 0.12
TRBV10-1A0A0K0K1A3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV10-1A0A0K0K1A3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.78■□□□□ 0.12
TRBV10-1A0A0K0K1A3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC15.78■□□□□ 0.12
TRBV10-1A0A0K0K1A3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV10-1A0A0K0K1A3 AL353803.4-201ENST00000565882 1934 ntBASIC15.78■□□□□ 0.12
TRBV10-1A0A0K0K1A3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TRBV10-1A0A0K0K1A3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV10-1A0A0K0K1A3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRBV10-1A0A0K0K1A3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.78■□□□□ 0.12
TRBV10-1A0A0K0K1A3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV10-1A0A0K0K1A3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.77■□□□□ 0.12
TRBV10-1A0A0K0K1A3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
TRBV10-1A0A0K0K1A3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV10-1A0A0K0K1A3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC15.77■□□□□ 0.12
TRBV10-1A0A0K0K1A3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV10-1A0A0K0K1A3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV10-1A0A0K0K1A3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.77■□□□□ 0.12
TRBV10-1A0A0K0K1A3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV10-1A0A0K0K1A3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV10-1A0A0K0K1A3 AC144652.1-201ENST00000609974 1624 ntBASIC15.77■□□□□ 0.12
TRBV10-1A0A0K0K1A3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC15.77■□□□□ 0.12
TRBV10-1A0A0K0K1A3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC15.77■□□□□ 0.12
TRBV10-1A0A0K0K1A3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15.77■□□□□ 0.12
TRBV10-1A0A0K0K1A3 AL031848.2-201ENST00000607670 837 ntBASIC15.77■□□□□ 0.12
TRBV10-1A0A0K0K1A3 MIR6722-201ENST00000617286 78 ntBASIC15.77■□□□□ 0.12
TRBV10-1A0A0K0K1A3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV10-1A0A0K0K1A3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV10-1A0A0K0K1A3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV10-1A0A0K0K1A3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV10-1A0A0K0K1A3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 AC005703.6-201ENST00000623265 1329 ntBASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 GUSBP5-202ENST00000510805 1989 ntBASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV10-1A0A0K0K1A3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRBV10-1A0A0K0K1A3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV10-1A0A0K0K1A3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRBV10-1A0A0K0K1A3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV10-1A0A0K0K1A3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC15.75■□□□□ 0.11
TRBV10-1A0A0K0K1A3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV10-1A0A0K0K1A3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV10-1A0A0K0K1A3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV10-1A0A0K0K1A3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV10-1A0A0K0K1A3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV10-1A0A0K0K1A3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC15.75■□□□□ 0.11
TRBV10-1A0A0K0K1A3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms