Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRAV20A0A0B4J274 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.89■□□□□ 0.61
TRAV20A0A0B4J274 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRAV20A0A0B4J274 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV20A0A0B4J274 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV20A0A0B4J274 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV20A0A0B4J274 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV20A0A0B4J274 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV20A0A0B4J274 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAV20A0A0B4J274 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV20A0A0B4J274 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV20A0A0B4J274 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV20A0A0B4J274 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV20A0A0B4J274 AC024257.2-201ENST00000549699 147 ntBASIC18.88■□□□□ 0.61
TRAV20A0A0B4J274 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.88■□□□□ 0.61
TRAV20A0A0B4J274 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAV20A0A0B4J274 AL355001.2-201ENST00000620617 1191 ntBASIC18.88■□□□□ 0.61
TRAV20A0A0B4J274 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAV20A0A0B4J274 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAV20A0A0B4J274 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAV20A0A0B4J274 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAV20A0A0B4J274 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAV20A0A0B4J274 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRAV20A0A0B4J274 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TRAV20A0A0B4J274 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV20A0A0B4J274 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV20A0A0B4J274 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TRAV20A0A0B4J274 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TRAV20A0A0B4J274 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRAV20A0A0B4J274 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV20A0A0B4J274 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV20A0A0B4J274 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV20A0A0B4J274 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV20A0A0B4J274 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.87■□□□□ 0.61
TRAV20A0A0B4J274 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV20A0A0B4J274 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.87■□□□□ 0.61
TRAV20A0A0B4J274 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV20A0A0B4J274 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV20A0A0B4J274 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.86■□□□□ 0.61
TRAV20A0A0B4J274 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV20A0A0B4J274 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV20A0A0B4J274 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV20A0A0B4J274 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV20A0A0B4J274 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV20A0A0B4J274 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV20A0A0B4J274 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV20A0A0B4J274 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.86■□□□□ 0.61
TRAV20A0A0B4J274 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV20A0A0B4J274 AC145676.1-201ENST00000514988 2004 ntBASIC18.86■□□□□ 0.61
TRAV20A0A0B4J274 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.86■□□□□ 0.61
TRAV20A0A0B4J274 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.86■□□□□ 0.61
TRAV20A0A0B4J274 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV20A0A0B4J274 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV20A0A0B4J274 SYT6-210ENST00000641643 1587 ntBASIC18.85■□□□□ 0.61
TRAV20A0A0B4J274 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV20A0A0B4J274 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV20A0A0B4J274 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV20A0A0B4J274 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV20A0A0B4J274 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV20A0A0B4J274 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.85■□□□□ 0.61
TRAV20A0A0B4J274 SUDS3P1-201ENST00000505831 966 ntBASIC18.85■□□□□ 0.61
TRAV20A0A0B4J274 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAV20A0A0B4J274 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAV20A0A0B4J274 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV20A0A0B4J274 ABCB10P4-201ENST00000566803 2184 ntBASIC18.85■□□□□ 0.61
TRAV20A0A0B4J274 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV20A0A0B4J274 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV20A0A0B4J274 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV20A0A0B4J274 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV20A0A0B4J274 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV20A0A0B4J274 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV20A0A0B4J274 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV20A0A0B4J274 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV20A0A0B4J274 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.84■□□□□ 0.61
TRAV20A0A0B4J274 AL031432.3-201ENST00000607698 485 ntBASIC18.84■□□□□ 0.61
TRAV20A0A0B4J274 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAV20A0A0B4J274 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV20A0A0B4J274 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV20A0A0B4J274 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV20A0A0B4J274 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAV20A0A0B4J274 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV20A0A0B4J274 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV20A0A0B4J274 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV20A0A0B4J274 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV20A0A0B4J274 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.83■□□□□ 0.61
TRAV20A0A0B4J274 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV20A0A0B4J274 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
TRAV20A0A0B4J274 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAV20A0A0B4J274 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV20A0A0B4J274 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV20A0A0B4J274 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TRAV20A0A0B4J274 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TRAV20A0A0B4J274 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.83■□□□□ 0.6
TRAV20A0A0B4J274 AL161729.1-201ENST00000604104 1402 ntBASIC18.83■□□□□ 0.6
TRAV20A0A0B4J274 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV20A0A0B4J274 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRAV20A0A0B4J274 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV20A0A0B4J274 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV20A0A0B4J274 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAV20A0A0B4J274 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms