Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TRAV6A0A075B6T7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRAV6A0A075B6T7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.16■□□□□ 0.66
TRAV6A0A075B6T7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TRAV6A0A075B6T7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
TRAV6A0A075B6T7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV6A0A075B6T7 AC139530.1-201ENST00000575312 1977 ntBASIC19.16■□□□□ 0.66
TRAV6A0A075B6T7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.16■□□□□ 0.66
TRAV6A0A075B6T7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV6A0A075B6T7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TRAV6A0A075B6T7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV6A0A075B6T7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV6A0A075B6T7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TRAV6A0A075B6T7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAV6A0A075B6T7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRAV6A0A075B6T7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRAV6A0A075B6T7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV6A0A075B6T7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV6A0A075B6T7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV6A0A075B6T7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TRAV6A0A075B6T7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TRAV6A0A075B6T7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAV6A0A075B6T7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRAV6A0A075B6T7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TRAV6A0A075B6T7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV6A0A075B6T7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAV6A0A075B6T7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRAV6A0A075B6T7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TRAV6A0A075B6T7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TRAV6A0A075B6T7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.14■□□□□ 0.66
TRAV6A0A075B6T7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.14■□□□□ 0.65
TRAV6A0A075B6T7 AC092667.1-201ENST00000434301 2586 ntBASIC19.14■□□□□ 0.65
TRAV6A0A075B6T7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.14■□□□□ 0.65
TRAV6A0A075B6T7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV6A0A075B6T7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.14■□□□□ 0.65
TRAV6A0A075B6T7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV6A0A075B6T7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TRAV6A0A075B6T7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV6A0A075B6T7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV6A0A075B6T7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV6A0A075B6T7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRAV6A0A075B6T7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAV6A0A075B6T7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV6A0A075B6T7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV6A0A075B6T7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAV6A0A075B6T7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRAV6A0A075B6T7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV6A0A075B6T7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV6A0A075B6T7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV6A0A075B6T7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV6A0A075B6T7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV6A0A075B6T7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV6A0A075B6T7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAV6A0A075B6T7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV6A0A075B6T7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV6A0A075B6T7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.12■□□□□ 0.65
TRAV6A0A075B6T7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV6A0A075B6T7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV6A0A075B6T7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV6A0A075B6T7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TRAV6A0A075B6T7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV6A0A075B6T7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV6A0A075B6T7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV6A0A075B6T7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TRAV6A0A075B6T7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV6A0A075B6T7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV6A0A075B6T7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV6A0A075B6T7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV6A0A075B6T7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV6A0A075B6T7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV6A0A075B6T7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV6A0A075B6T7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRAV6A0A075B6T7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV6A0A075B6T7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV6A0A075B6T7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV6A0A075B6T7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV6A0A075B6T7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV6A0A075B6T7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV6A0A075B6T7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV6A0A075B6T7 AC087741.3-201ENST00000624270 1347 ntBASIC19.1■□□□□ 0.65
TRAV6A0A075B6T7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV6A0A075B6T7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV6A0A075B6T7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TRAV6A0A075B6T7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TRAV6A0A075B6T7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV6A0A075B6T7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV6A0A075B6T7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV6A0A075B6T7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
TRAV6A0A075B6T7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TRAV6A0A075B6T7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV6A0A075B6T7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV6A0A075B6T7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV6A0A075B6T7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV6A0A075B6T7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.09■□□□□ 0.65
TRAV6A0A075B6T7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV6A0A075B6T7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV6A0A075B6T7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV6A0A075B6T7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.09■□□□□ 0.65
TRAV6A0A075B6T7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV6A0A075B6T7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms