Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Snrnp48Q9D361 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.21■■□□□ 1.79
Snrnp48Q9D361 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Snrnp48Q9D361 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Snrnp48Q9D361 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Snrnp48Q9D361 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Snrnp48Q9D361 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Snrnp48Q9D361 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
Snrnp48Q9D361 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Snrnp48Q9D361 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
Snrnp48Q9D361 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Snrnp48Q9D361 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.03■■□□□ 1.76
Snrnp48Q9D361 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Snrnp48Q9D361 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26■■□□□ 1.75
Snrnp48Q9D361 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Snrnp48Q9D361 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Snrnp48Q9D361 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Snrnp48Q9D361 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Snrnp48Q9D361 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
Snrnp48Q9D361 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Snrnp48Q9D361 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Snrnp48Q9D361 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
Snrnp48Q9D361 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Snrnp48Q9D361 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Snrnp48Q9D361 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Snrnp48Q9D361 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Snrnp48Q9D361 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Snrnp48Q9D361 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Snrnp48Q9D361 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.91■■□□□ 1.74
Snrnp48Q9D361 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Snrnp48Q9D361 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Snrnp48Q9D361 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Snrnp48Q9D361 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Snrnp48Q9D361 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Snrnp48Q9D361 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
Snrnp48Q9D361 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Snrnp48Q9D361 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Snrnp48Q9D361 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Snrnp48Q9D361 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
Snrnp48Q9D361 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Snrnp48Q9D361 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Snrnp48Q9D361 Gm24804-201ENSMUST00000174982 85 ntBASIC25.82■■□□□ 1.72
Snrnp48Q9D361 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Snrnp48Q9D361 Peli2-204ENSMUST00000226513 1320 ntBASIC25.81■■□□□ 1.72
Snrnp48Q9D361 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Snrnp48Q9D361 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Snrnp48Q9D361 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.77■■□□□ 1.72
Snrnp48Q9D361 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Snrnp48Q9D361 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
Snrnp48Q9D361 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Snrnp48Q9D361 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.73■■□□□ 1.71
Snrnp48Q9D361 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Snrnp48Q9D361 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
Snrnp48Q9D361 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Snrnp48Q9D361 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.7■■□□□ 1.71
Snrnp48Q9D361 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Snrnp48Q9D361 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Snrnp48Q9D361 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Snrnp48Q9D361 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
Snrnp48Q9D361 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Snrnp48Q9D361 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Snrnp48Q9D361 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Snrnp48Q9D361 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Snrnp48Q9D361 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Snrnp48Q9D361 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.6■■□□□ 1.69
Snrnp48Q9D361 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.58■■□□□ 1.69
Snrnp48Q9D361 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Snrnp48Q9D361 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.57■■□□□ 1.68
Snrnp48Q9D361 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Snrnp48Q9D361 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Snrnp48Q9D361 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
Snrnp48Q9D361 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.55■■□□□ 1.68
Snrnp48Q9D361 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Snrnp48Q9D361 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Snrnp48Q9D361 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Snrnp48Q9D361 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Snrnp48Q9D361 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Snrnp48Q9D361 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Snrnp48Q9D361 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Snrnp48Q9D361 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Snrnp48Q9D361 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Snrnp48Q9D361 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Snrnp48Q9D361 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Snrnp48Q9D361 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.51■■□□□ 1.67
Snrnp48Q9D361 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.5■■□□□ 1.67
Snrnp48Q9D361 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Snrnp48Q9D361 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
Snrnp48Q9D361 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.49■■□□□ 1.67
Snrnp48Q9D361 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.48■■□□□ 1.67
Snrnp48Q9D361 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
Snrnp48Q9D361 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Snrnp48Q9D361 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Snrnp48Q9D361 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Snrnp48Q9D361 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.47■■□□□ 1.67
Snrnp48Q9D361 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Snrnp48Q9D361 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.46■■□□□ 1.67
Snrnp48Q9D361 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.44■■□□□ 1.66
Snrnp48Q9D361 Gm16148-201ENSMUST00000119653 893 ntBASIC25.44■■□□□ 1.66
Snrnp48Q9D361 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Snrnp48Q9D361 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms