Protein–RNA interactions for Protein: Q9CXX9

Cuedc2, CUE domain-containing protein 2, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc2Q9CXX9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.28■■□□□ 1.96
Cuedc2Q9CXX9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
Cuedc2Q9CXX9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Cuedc2Q9CXX9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Cuedc2Q9CXX9 Gm27322-201ENSMUST00000184007 104 ntBASIC27.24■■□□□ 1.95
Cuedc2Q9CXX9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.24■■□□□ 1.95
Cuedc2Q9CXX9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cuedc2Q9CXX9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.21■■□□□ 1.95
Cuedc2Q9CXX9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.21■■□□□ 1.95
Cuedc2Q9CXX9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cuedc2Q9CXX9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Cuedc2Q9CXX9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Cuedc2Q9CXX9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.2■■□□□ 1.94
Cuedc2Q9CXX9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.16■■□□□ 1.94
Cuedc2Q9CXX9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cuedc2Q9CXX9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Cuedc2Q9CXX9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Cuedc2Q9CXX9 Gm8109-201ENSMUST00000194076 746 ntBASIC27.13■■□□□ 1.93
Cuedc2Q9CXX9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cuedc2Q9CXX9 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.11■■□□□ 1.93
Cuedc2Q9CXX9 Gm26115-201ENSMUST00000175605 87 ntBASIC27.09■■□□□ 1.93
Cuedc2Q9CXX9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Cuedc2Q9CXX9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Cuedc2Q9CXX9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Cuedc2Q9CXX9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
Cuedc2Q9CXX9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Cuedc2Q9CXX9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Cuedc2Q9CXX9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27■■□□□ 1.91
Cuedc2Q9CXX9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Cuedc2Q9CXX9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Cuedc2Q9CXX9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Cuedc2Q9CXX9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Cuedc2Q9CXX9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Cuedc2Q9CXX9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Cuedc2Q9CXX9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
Cuedc2Q9CXX9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
Cuedc2Q9CXX9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.92■■□□□ 1.9
Cuedc2Q9CXX9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Cuedc2Q9CXX9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Cuedc2Q9CXX9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Cuedc2Q9CXX9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Cuedc2Q9CXX9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cuedc2Q9CXX9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cuedc2Q9CXX9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cuedc2Q9CXX9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Cuedc2Q9CXX9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Cuedc2Q9CXX9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Cuedc2Q9CXX9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.83■■□□□ 1.89
Cuedc2Q9CXX9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Cuedc2Q9CXX9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
Cuedc2Q9CXX9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Cuedc2Q9CXX9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Cuedc2Q9CXX9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Cuedc2Q9CXX9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
Cuedc2Q9CXX9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Cuedc2Q9CXX9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.78■■□□□ 1.88
Cuedc2Q9CXX9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Cuedc2Q9CXX9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Cuedc2Q9CXX9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Cuedc2Q9CXX9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Cuedc2Q9CXX9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Cuedc2Q9CXX9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
Cuedc2Q9CXX9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cuedc2Q9CXX9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cuedc2Q9CXX9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cuedc2Q9CXX9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cuedc2Q9CXX9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cuedc2Q9CXX9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cuedc2Q9CXX9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Cuedc2Q9CXX9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cuedc2Q9CXX9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cuedc2Q9CXX9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cuedc2Q9CXX9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cuedc2Q9CXX9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cuedc2Q9CXX9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.62■■□□□ 1.85
Cuedc2Q9CXX9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cuedc2Q9CXX9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Cuedc2Q9CXX9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cuedc2Q9CXX9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cuedc2Q9CXX9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cuedc2Q9CXX9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.57■■□□□ 1.84
Cuedc2Q9CXX9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cuedc2Q9CXX9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
Cuedc2Q9CXX9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.54■■□□□ 1.84
Cuedc2Q9CXX9 Peli2-204ENSMUST00000226513 1320 ntBASIC26.53■■□□□ 1.84
Cuedc2Q9CXX9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cuedc2Q9CXX9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Cuedc2Q9CXX9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.52■■□□□ 1.84
Cuedc2Q9CXX9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cuedc2Q9CXX9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cuedc2Q9CXX9 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.51■■□□□ 1.83
Cuedc2Q9CXX9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Cuedc2Q9CXX9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.48■■□□□ 1.83
Cuedc2Q9CXX9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Cuedc2Q9CXX9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Cuedc2Q9CXX9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
Cuedc2Q9CXX9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
Cuedc2Q9CXX9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cuedc2Q9CXX9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cuedc2Q9CXX9 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.44■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms