Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.01■■■□□ 2.55
Pcdhb22Q91XZ8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Pcdhb22Q91XZ8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Pcdhb22Q91XZ8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Pcdhb22Q91XZ8 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.95■■■□□ 2.54
Pcdhb22Q91XZ8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
Pcdhb22Q91XZ8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Pcdhb22Q91XZ8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Pcdhb22Q91XZ8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
Pcdhb22Q91XZ8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Pcdhb22Q91XZ8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.87■■■□□ 2.53
Pcdhb22Q91XZ8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Pcdhb22Q91XZ8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Pcdhb22Q91XZ8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Pcdhb22Q91XZ8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Pcdhb22Q91XZ8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Pcdhb22Q91XZ8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Pcdhb22Q91XZ8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.75■■■□□ 2.51
Pcdhb22Q91XZ8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Pcdhb22Q91XZ8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Pcdhb22Q91XZ8 Gm24804-201ENSMUST00000174982 85 ntBASIC30.73■■■□□ 2.51
Pcdhb22Q91XZ8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Pcdhb22Q91XZ8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Pcdhb22Q91XZ8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
Pcdhb22Q91XZ8 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.71■■■□□ 2.51
Pcdhb22Q91XZ8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
Pcdhb22Q91XZ8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Pcdhb22Q91XZ8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Pcdhb22Q91XZ8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Pcdhb22Q91XZ8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Pcdhb22Q91XZ8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Pcdhb22Q91XZ8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Pcdhb22Q91XZ8 Peli2-204ENSMUST00000226513 1320 ntBASIC30.64■■■□□ 2.5
Pcdhb22Q91XZ8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Pcdhb22Q91XZ8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Pcdhb22Q91XZ8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Pcdhb22Q91XZ8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Pcdhb22Q91XZ8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
Pcdhb22Q91XZ8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Pcdhb22Q91XZ8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Pcdhb22Q91XZ8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
Pcdhb22Q91XZ8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.51■■■□□ 2.47
Pcdhb22Q91XZ8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Pcdhb22Q91XZ8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Pcdhb22Q91XZ8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Pcdhb22Q91XZ8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.45■■■□□ 2.47
Pcdhb22Q91XZ8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Pcdhb22Q91XZ8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
Pcdhb22Q91XZ8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30.43■■■□□ 2.46
Pcdhb22Q91XZ8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Pcdhb22Q91XZ8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Pcdhb22Q91XZ8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
Pcdhb22Q91XZ8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
Pcdhb22Q91XZ8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.39■■■□□ 2.46
Pcdhb22Q91XZ8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Pcdhb22Q91XZ8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Pcdhb22Q91XZ8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Pcdhb22Q91XZ8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Pcdhb22Q91XZ8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
Pcdhb22Q91XZ8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
Pcdhb22Q91XZ8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Pcdhb22Q91XZ8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
Pcdhb22Q91XZ8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Pcdhb22Q91XZ8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.3■■■□□ 2.44
Pcdhb22Q91XZ8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Pcdhb22Q91XZ8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Pcdhb22Q91XZ8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
Pcdhb22Q91XZ8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Pcdhb22Q91XZ8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.26■■■□□ 2.44
Pcdhb22Q91XZ8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pcdhb22Q91XZ8 Gm16148-201ENSMUST00000119653 893 ntBASIC30.22■■■□□ 2.43
Pcdhb22Q91XZ8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.22■■■□□ 2.43
Pcdhb22Q91XZ8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Pcdhb22Q91XZ8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Pcdhb22Q91XZ8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Pcdhb22Q91XZ8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Pcdhb22Q91XZ8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Pcdhb22Q91XZ8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Pcdhb22Q91XZ8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Pcdhb22Q91XZ8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.16■■■□□ 2.42
Pcdhb22Q91XZ8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
Pcdhb22Q91XZ8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
Pcdhb22Q91XZ8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.15■■■□□ 2.42
Pcdhb22Q91XZ8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Pcdhb22Q91XZ8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
Pcdhb22Q91XZ8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Pcdhb22Q91XZ8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Pcdhb22Q91XZ8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.13■■■□□ 2.41
Pcdhb22Q91XZ8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Pcdhb22Q91XZ8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Pcdhb22Q91XZ8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Pcdhb22Q91XZ8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Pcdhb22Q91XZ8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Pcdhb22Q91XZ8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.08■■■□□ 2.41
Pcdhb22Q91XZ8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
Pcdhb22Q91XZ8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Pcdhb22Q91XZ8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Pcdhb22Q91XZ8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Pcdhb22Q91XZ8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Pcdhb22Q91XZ8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.02■■■□□ 2.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms