Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.93■■□□□ 1.9
Pcdhb11Q91UZ8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Pcdhb11Q91UZ8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Pcdhb11Q91UZ8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Pcdhb11Q91UZ8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Pcdhb11Q91UZ8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Pcdhb11Q91UZ8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
Pcdhb11Q91UZ8 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.86■■□□□ 1.89
Pcdhb11Q91UZ8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
Pcdhb11Q91UZ8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Pcdhb11Q91UZ8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.84■■□□□ 1.89
Pcdhb11Q91UZ8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdhb11Q91UZ8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Pcdhb11Q91UZ8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Pcdhb11Q91UZ8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdhb11Q91UZ8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Pcdhb11Q91UZ8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Pcdhb11Q91UZ8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pcdhb11Q91UZ8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pcdhb11Q91UZ8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pcdhb11Q91UZ8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Pcdhb11Q91UZ8 Gm24804-201ENSMUST00000174982 85 ntBASIC26.7■■□□□ 1.86
Pcdhb11Q91UZ8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdhb11Q91UZ8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdhb11Q91UZ8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.68■■□□□ 1.86
Pcdhb11Q91UZ8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdhb11Q91UZ8 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.66■■□□□ 1.86
Pcdhb11Q91UZ8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdhb11Q91UZ8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Pcdhb11Q91UZ8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdhb11Q91UZ8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
Pcdhb11Q91UZ8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdhb11Q91UZ8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Pcdhb11Q91UZ8 Peli2-204ENSMUST00000226513 1320 ntBASIC26.61■■□□□ 1.85
Pcdhb11Q91UZ8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pcdhb11Q91UZ8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Pcdhb11Q91UZ8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pcdhb11Q91UZ8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdhb11Q91UZ8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdhb11Q91UZ8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhb11Q91UZ8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhb11Q91UZ8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Pcdhb11Q91UZ8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.5■■□□□ 1.83
Pcdhb11Q91UZ8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Pcdhb11Q91UZ8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhb11Q91UZ8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.47■■□□□ 1.83
Pcdhb11Q91UZ8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Pcdhb11Q91UZ8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pcdhb11Q91UZ8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdhb11Q91UZ8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdhb11Q91UZ8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.43■■□□□ 1.82
Pcdhb11Q91UZ8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
Pcdhb11Q91UZ8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdhb11Q91UZ8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Pcdhb11Q91UZ8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pcdhb11Q91UZ8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.4■■□□□ 1.82
Pcdhb11Q91UZ8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdhb11Q91UZ8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdhb11Q91UZ8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdhb11Q91UZ8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcdhb11Q91UZ8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Pcdhb11Q91UZ8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
Pcdhb11Q91UZ8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdhb11Q91UZ8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdhb11Q91UZ8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdhb11Q91UZ8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdhb11Q91UZ8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdhb11Q91UZ8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.31■■□□□ 1.8
Pcdhb11Q91UZ8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Pcdhb11Q91UZ8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
Pcdhb11Q91UZ8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
Pcdhb11Q91UZ8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Pcdhb11Q91UZ8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdhb11Q91UZ8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhb11Q91UZ8 Gm16148-201ENSMUST00000119653 893 ntBASIC26.22■■□□□ 1.79
Pcdhb11Q91UZ8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.22■■□□□ 1.79
Pcdhb11Q91UZ8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhb11Q91UZ8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Pcdhb11Q91UZ8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Pcdhb11Q91UZ8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Pcdhb11Q91UZ8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Pcdhb11Q91UZ8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Pcdhb11Q91UZ8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdhb11Q91UZ8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.18■■□□□ 1.78
Pcdhb11Q91UZ8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Pcdhb11Q91UZ8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Pcdhb11Q91UZ8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Pcdhb11Q91UZ8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Pcdhb11Q91UZ8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Pcdhb11Q91UZ8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Pcdhb11Q91UZ8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.14■■□□□ 1.78
Pcdhb11Q91UZ8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Pcdhb11Q91UZ8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.14■■□□□ 1.78
Pcdhb11Q91UZ8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Pcdhb11Q91UZ8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdhb11Q91UZ8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.12■■□□□ 1.77
Pcdhb11Q91UZ8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Pcdhb11Q91UZ8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdhb11Q91UZ8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdhb11Q91UZ8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms