Protein–RNA interactions for Protein: Q8R1E9

Scgb2b27, ABPBG27, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scgb2b27Q8R1E9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22,68■■□□□ 1,22
Scgb2b27Q8R1E9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22,67■■□□□ 1,22
Scgb2b27Q8R1E9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22,65■■□□□ 1,22
Scgb2b27Q8R1E9 Gm2415-204ENSMUST00000190235 2004 ntBASIC22,65■■□□□ 1,22
Scgb2b27Q8R1E9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22,6■■□□□ 1,21
Scgb2b27Q8R1E9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22,59■■□□□ 1,21
Scgb2b27Q8R1E9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22,59■■□□□ 1,21
Scgb2b27Q8R1E9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22,57■■□□□ 1,2
Scgb2b27Q8R1E9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22,57■■□□□ 1,2
Scgb2b27Q8R1E9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22,55■■□□□ 1,2
Scgb2b27Q8R1E9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22,54■■□□□ 1,2
Scgb2b27Q8R1E9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22,53■■□□□ 1,2
Scgb2b27Q8R1E9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22,53■■□□□ 1,2
Scgb2b27Q8R1E9 Gm6658-202ENSMUST00000209493 1885 ntBASIC22,52■■□□□ 1,2
Scgb2b27Q8R1E9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22,52■■□□□ 1,2
Scgb2b27Q8R1E9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22,5■■□□□ 1,19
Scgb2b27Q8R1E9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22,48■■□□□ 1,19
Scgb2b27Q8R1E9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22,48■■□□□ 1,19
Scgb2b27Q8R1E9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22,47■■□□□ 1,19
Scgb2b27Q8R1E9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22,45■■□□□ 1,19
Scgb2b27Q8R1E9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22,44■■□□□ 1,18
Scgb2b27Q8R1E9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22,43■■□□□ 1,18
Scgb2b27Q8R1E9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22,42■■□□□ 1,18
Scgb2b27Q8R1E9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22,42■■□□□ 1,18
Scgb2b27Q8R1E9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22,41■■□□□ 1,18
Scgb2b27Q8R1E9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22,4■■□□□ 1,18
Scgb2b27Q8R1E9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22,39■■□□□ 1,18
Scgb2b27Q8R1E9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22,39■■□□□ 1,17
Scgb2b27Q8R1E9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22,39■■□□□ 1,17
Scgb2b27Q8R1E9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22,36■■□□□ 1,17
Scgb2b27Q8R1E9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22,36■■□□□ 1,17
Scgb2b27Q8R1E9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22,36■■□□□ 1,17
Scgb2b27Q8R1E9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22,35■■□□□ 1,17
Scgb2b27Q8R1E9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22,35■■□□□ 1,17
Scgb2b27Q8R1E9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22,35■■□□□ 1,17
Scgb2b27Q8R1E9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22,34■■□□□ 1,17
Scgb2b27Q8R1E9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22,33■■□□□ 1,17
Scgb2b27Q8R1E9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22,33■■□□□ 1,17
Scgb2b27Q8R1E9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22,32■■□□□ 1,16
Scgb2b27Q8R1E9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22,31■■□□□ 1,16
Scgb2b27Q8R1E9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22,31■■□□□ 1,16
Scgb2b27Q8R1E9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22,3■■□□□ 1,16
Scgb2b27Q8R1E9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22,29■■□□□ 1,16
Scgb2b27Q8R1E9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22,29■■□□□ 1,16
Scgb2b27Q8R1E9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22,28■■□□□ 1,16
Scgb2b27Q8R1E9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22,28■■□□□ 1,16
Scgb2b27Q8R1E9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22,28■■□□□ 1,16
Scgb2b27Q8R1E9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22,27■■□□□ 1,16
Scgb2b27Q8R1E9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22,27■■□□□ 1,15
Scgb2b27Q8R1E9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22,26■■□□□ 1,15
Scgb2b27Q8R1E9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22,25■■□□□ 1,15
Scgb2b27Q8R1E9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22,25■■□□□ 1,15
Scgb2b27Q8R1E9 Gm24804-201ENSMUST00000174982 85 ntBASIC22,24■■□□□ 1,15
Scgb2b27Q8R1E9 Peli2-204ENSMUST00000226513 1320 ntBASIC22,22■■□□□ 1,15
Scgb2b27Q8R1E9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22,2■■□□□ 1,14
Scgb2b27Q8R1E9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22,19■■□□□ 1,14
Scgb2b27Q8R1E9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22,19■■□□□ 1,14
Scgb2b27Q8R1E9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22,17■■□□□ 1,14
Scgb2b27Q8R1E9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22,17■■□□□ 1,14
Scgb2b27Q8R1E9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22,16■■□□□ 1,14
Scgb2b27Q8R1E9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22,16■■□□□ 1,14
Scgb2b27Q8R1E9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22,16■■□□□ 1,14
Scgb2b27Q8R1E9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22,15■■□□□ 1,14
Scgb2b27Q8R1E9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22,15■■□□□ 1,14
Scgb2b27Q8R1E9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22,14■■□□□ 1,14
Scgb2b27Q8R1E9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22,14■■□□□ 1,13
Scgb2b27Q8R1E9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22,13■■□□□ 1,13
Scgb2b27Q8R1E9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22,12■■□□□ 1,13
Scgb2b27Q8R1E9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22,11■■□□□ 1,13
Scgb2b27Q8R1E9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22,08■■□□□ 1,13
Scgb2b27Q8R1E9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22,07■■□□□ 1,12
Scgb2b27Q8R1E9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22,07■■□□□ 1,12
Scgb2b27Q8R1E9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22,06■■□□□ 1,12
Scgb2b27Q8R1E9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22,06■■□□□ 1,12
Scgb2b27Q8R1E9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22,05■■□□□ 1,12
Scgb2b27Q8R1E9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22,04■■□□□ 1,12
Scgb2b27Q8R1E9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22,04■■□□□ 1,12
Scgb2b27Q8R1E9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22,04■■□□□ 1,12
Scgb2b27Q8R1E9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22,03■■□□□ 1,12
Scgb2b27Q8R1E9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22,03■■□□□ 1,12
Scgb2b27Q8R1E9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22,01■■□□□ 1,11
Scgb2b27Q8R1E9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22,01■■□□□ 1,11
Scgb2b27Q8R1E9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22,01■■□□□ 1,11
Scgb2b27Q8R1E9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1,11
Scgb2b27Q8R1E9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22■■□□□ 1,11
Scgb2b27Q8R1E9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1,11
Scgb2b27Q8R1E9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22■■□□□ 1,11
Scgb2b27Q8R1E9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21,99■■□□□ 1,11
Scgb2b27Q8R1E9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21,99■■□□□ 1,11
Scgb2b27Q8R1E9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21,99■■□□□ 1,11
Scgb2b27Q8R1E9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21,99■■□□□ 1,11
Scgb2b27Q8R1E9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21,98■■□□□ 1,11
Scgb2b27Q8R1E9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21,98■■□□□ 1,11
Scgb2b27Q8R1E9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21,98■■□□□ 1,11
Scgb2b27Q8R1E9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21,98■■□□□ 1,11
Scgb2b27Q8R1E9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21,98■■□□□ 1,11
Scgb2b27Q8R1E9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21,98■■□□□ 1,11
Scgb2b27Q8R1E9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21,97■■□□□ 1,11
Scgb2b27Q8R1E9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21,96■■□□□ 1,11
Scgb2b27Q8R1E9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21,96■■□□□ 1,11
Retrieved 100 of 76,532 protein–RNA pairs in 17,9 ms