Protein–RNA interactions for Protein: Q8BWB1

Synpo2l, Synaptopodin 2-like protein, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Synpo2lQ8BWB1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Synpo2lQ8BWB1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Synpo2lQ8BWB1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Synpo2lQ8BWB1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Synpo2lQ8BWB1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.21■■□□□ 1.47
Synpo2lQ8BWB1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Synpo2lQ8BWB1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Synpo2lQ8BWB1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Synpo2lQ8BWB1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Synpo2lQ8BWB1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Synpo2lQ8BWB1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Synpo2lQ8BWB1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Synpo2lQ8BWB1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Synpo2lQ8BWB1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Synpo2lQ8BWB1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Synpo2lQ8BWB1 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.08■■□□□ 1.45
Synpo2lQ8BWB1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.08■■□□□ 1.45
Synpo2lQ8BWB1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Synpo2lQ8BWB1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Synpo2lQ8BWB1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Synpo2lQ8BWB1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.05■■□□□ 1.44
Synpo2lQ8BWB1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.05■■□□□ 1.44
Synpo2lQ8BWB1 Peli2-204ENSMUST00000226513 1320 ntBASIC24.03■■□□□ 1.44
Synpo2lQ8BWB1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Synpo2lQ8BWB1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Synpo2lQ8BWB1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Synpo2lQ8BWB1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Synpo2lQ8BWB1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Synpo2lQ8BWB1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Synpo2lQ8BWB1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.98■■□□□ 1.43
Synpo2lQ8BWB1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Synpo2lQ8BWB1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Synpo2lQ8BWB1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Synpo2lQ8BWB1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Synpo2lQ8BWB1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Synpo2lQ8BWB1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Synpo2lQ8BWB1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
Synpo2lQ8BWB1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Synpo2lQ8BWB1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Synpo2lQ8BWB1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Synpo2lQ8BWB1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Synpo2lQ8BWB1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Synpo2lQ8BWB1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.91■■□□□ 1.42
Synpo2lQ8BWB1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Synpo2lQ8BWB1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Synpo2lQ8BWB1 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.87■■□□□ 1.41
Synpo2lQ8BWB1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Synpo2lQ8BWB1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Synpo2lQ8BWB1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Synpo2lQ8BWB1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Synpo2lQ8BWB1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
Synpo2lQ8BWB1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Synpo2lQ8BWB1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Synpo2lQ8BWB1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Synpo2lQ8BWB1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Synpo2lQ8BWB1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Synpo2lQ8BWB1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Synpo2lQ8BWB1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Synpo2lQ8BWB1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Synpo2lQ8BWB1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Synpo2lQ8BWB1 Gm16148-201ENSMUST00000119653 893 ntBASIC23.69■■□□□ 1.38
Synpo2lQ8BWB1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Synpo2lQ8BWB1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.68■■□□□ 1.38
Synpo2lQ8BWB1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Synpo2lQ8BWB1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Synpo2lQ8BWB1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.67■■□□□ 1.38
Synpo2lQ8BWB1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.64■■□□□ 1.37
Synpo2lQ8BWB1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Synpo2lQ8BWB1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Synpo2lQ8BWB1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Synpo2lQ8BWB1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
Synpo2lQ8BWB1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
Synpo2lQ8BWB1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Synpo2lQ8BWB1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Synpo2lQ8BWB1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Synpo2lQ8BWB1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Synpo2lQ8BWB1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Synpo2lQ8BWB1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Synpo2lQ8BWB1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Synpo2lQ8BWB1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Synpo2lQ8BWB1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.59■■□□□ 1.37
Synpo2lQ8BWB1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Synpo2lQ8BWB1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Synpo2lQ8BWB1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Synpo2lQ8BWB1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Synpo2lQ8BWB1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.53■■□□□ 1.36
Synpo2lQ8BWB1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Synpo2lQ8BWB1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Synpo2lQ8BWB1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Synpo2lQ8BWB1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Synpo2lQ8BWB1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Synpo2lQ8BWB1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Synpo2lQ8BWB1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Synpo2lQ8BWB1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Synpo2lQ8BWB1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Synpo2lQ8BWB1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
Synpo2lQ8BWB1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Synpo2lQ8BWB1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.5■■□□□ 1.35
Synpo2lQ8BWB1 Zfp131-205ENSMUST00000223812 663 ntBASIC23.48■■□□□ 1.35
Synpo2lQ8BWB1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms