Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Gm2415-204ENSMUST00000190235 2004 ntBASIC30,68■■■□□ 2,5
VmacQ8BP01 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30,66■■■□□ 2,5
VmacQ8BP01 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30,65■■■□□ 2,5
VmacQ8BP01 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30,57■■■□□ 2,48
VmacQ8BP01 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30,57■■■□□ 2,48
VmacQ8BP01 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30,56■■■□□ 2,48
VmacQ8BP01 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30,55■■■□□ 2,48
VmacQ8BP01 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30,55■■■□□ 2,48
VmacQ8BP01 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30,47■■■□□ 2,47
VmacQ8BP01 Gm6658-202ENSMUST00000209493 1885 ntBASIC30,46■■■□□ 2,47
VmacQ8BP01 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30,46■■■□□ 2,47
VmacQ8BP01 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30,44■■■□□ 2,46
VmacQ8BP01 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30,43■■■□□ 2,46
VmacQ8BP01 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30,42■■■□□ 2,46
VmacQ8BP01 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30,42■■■□□ 2,46
VmacQ8BP01 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30,42■■■□□ 2,46
VmacQ8BP01 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30,39■■■□□ 2,46
VmacQ8BP01 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30,38■■■□□ 2,45
VmacQ8BP01 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30,37■■■□□ 2,45
VmacQ8BP01 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30,37■■■□□ 2,45
VmacQ8BP01 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30,36■■■□□ 2,45
VmacQ8BP01 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30,36■■■□□ 2,45
VmacQ8BP01 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30,35■■■□□ 2,45
VmacQ8BP01 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30,35■■■□□ 2,45
VmacQ8BP01 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30,33■■■□□ 2,45
VmacQ8BP01 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30,33■■■□□ 2,45
VmacQ8BP01 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30,32■■■□□ 2,44
VmacQ8BP01 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30,31■■■□□ 2,44
VmacQ8BP01 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30,3■■■□□ 2,44
VmacQ8BP01 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30,25■■■□□ 2,43
VmacQ8BP01 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30,24■■■□□ 2,43
VmacQ8BP01 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30,24■■■□□ 2,43
VmacQ8BP01 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30,23■■■□□ 2,43
VmacQ8BP01 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30,22■■■□□ 2,43
VmacQ8BP01 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30,21■■■□□ 2,43
VmacQ8BP01 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30,21■■■□□ 2,43
VmacQ8BP01 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30,2■■■□□ 2,43
VmacQ8BP01 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30,2■■■□□ 2,42
VmacQ8BP01 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30,2■■■□□ 2,42
VmacQ8BP01 Gm24804-201ENSMUST00000174982 85 ntBASIC30,19■■■□□ 2,42
VmacQ8BP01 Peli2-204ENSMUST00000226513 1320 ntBASIC30,19■■■□□ 2,42
VmacQ8BP01 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30,17■■■□□ 2,42
VmacQ8BP01 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30,14■■■□□ 2,42
VmacQ8BP01 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30,13■■■□□ 2,41
VmacQ8BP01 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30,12■■■□□ 2,41
VmacQ8BP01 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30,12■■■□□ 2,41
VmacQ8BP01 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30,1■■■□□ 2,41
VmacQ8BP01 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30,1■■■□□ 2,41
VmacQ8BP01 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30,08■■■□□ 2,41
VmacQ8BP01 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30,07■■■□□ 2,4
VmacQ8BP01 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30,06■■■□□ 2,4
VmacQ8BP01 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30,04■■■□□ 2,4
VmacQ8BP01 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30,01■■■□□ 2,4
VmacQ8BP01 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2,39
VmacQ8BP01 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2,39
VmacQ8BP01 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29,98■■■□□ 2,39
VmacQ8BP01 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC29,97■■■□□ 2,39
VmacQ8BP01 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC29,97■■■□□ 2,39
VmacQ8BP01 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC29,96■■■□□ 2,39
VmacQ8BP01 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29,94■■■□□ 2,38
VmacQ8BP01 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29,93■■■□□ 2,38
VmacQ8BP01 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC29,91■■■□□ 2,38
VmacQ8BP01 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC29,9■■■□□ 2,38
VmacQ8BP01 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC29,9■■■□□ 2,38
VmacQ8BP01 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29,9■■■□□ 2,38
VmacQ8BP01 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC29,89■■■□□ 2,38
VmacQ8BP01 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29,89■■■□□ 2,38
VmacQ8BP01 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC29,88■■■□□ 2,37
VmacQ8BP01 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29,88■■■□□ 2,37
VmacQ8BP01 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC29,88■■■□□ 2,37
VmacQ8BP01 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC29,86■■■□□ 2,37
VmacQ8BP01 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29,86■■■□□ 2,37
VmacQ8BP01 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC29,86■■■□□ 2,37
VmacQ8BP01 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC29,86■■■□□ 2,37
VmacQ8BP01 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29,86■■■□□ 2,37
VmacQ8BP01 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29,86■■■□□ 2,37
VmacQ8BP01 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC29,85■■■□□ 2,37
VmacQ8BP01 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29,85■■■□□ 2,37
VmacQ8BP01 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC29,84■■■□□ 2,37
VmacQ8BP01 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29,82■■■□□ 2,36
VmacQ8BP01 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29,81■■■□□ 2,36
VmacQ8BP01 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC29,81■■■□□ 2,36
VmacQ8BP01 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29,81■■■□□ 2,36
VmacQ8BP01 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC29,79■■■□□ 2,36
VmacQ8BP01 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC29,79■■■□□ 2,36
VmacQ8BP01 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC29,78■■■□□ 2,36
VmacQ8BP01 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC29,78■■■□□ 2,36
VmacQ8BP01 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC29,78■■■□□ 2,36
VmacQ8BP01 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC29,75■■■□□ 2,35
VmacQ8BP01 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC29,74■■■□□ 2,35
VmacQ8BP01 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC29,74■■■□□ 2,35
VmacQ8BP01 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC29,73■■■□□ 2,35
VmacQ8BP01 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29,73■■■□□ 2,35
VmacQ8BP01 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC29,73■■■□□ 2,35
VmacQ8BP01 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29,73■■■□□ 2,35
VmacQ8BP01 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29,72■■■□□ 2,35
VmacQ8BP01 Gm16148-201ENSMUST00000119653 893 ntBASIC29,72■■■□□ 2,35
VmacQ8BP01 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC29,72■■■□□ 2,35
VmacQ8BP01 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29,72■■■□□ 2,35
VmacQ8BP01 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC29,71■■■□□ 2,35
Retrieved 100 of 76,532 protein–RNA pairs in 11,6 ms