Protein–RNA interactions for Protein: Q8BNE1

Tcaf1, TRPM8 channel-associated factor 1, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcaf1Q8BNE1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Tcaf1Q8BNE1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Tcaf1Q8BNE1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Tcaf1Q8BNE1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Tcaf1Q8BNE1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Tcaf1Q8BNE1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
Tcaf1Q8BNE1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Tcaf1Q8BNE1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
Tcaf1Q8BNE1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.6■■■□□ 2.17
Tcaf1Q8BNE1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
Tcaf1Q8BNE1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.59■■■□□ 2.17
Tcaf1Q8BNE1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Tcaf1Q8BNE1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Tcaf1Q8BNE1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.57■■■□□ 2.16
Tcaf1Q8BNE1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Tcaf1Q8BNE1 Peli2-204ENSMUST00000226513 1320 ntBASIC28.57■■■□□ 2.16
Tcaf1Q8BNE1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Tcaf1Q8BNE1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Tcaf1Q8BNE1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Tcaf1Q8BNE1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Tcaf1Q8BNE1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Tcaf1Q8BNE1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.5■■■□□ 2.15
Tcaf1Q8BNE1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Tcaf1Q8BNE1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Tcaf1Q8BNE1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
Tcaf1Q8BNE1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Tcaf1Q8BNE1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
Tcaf1Q8BNE1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Tcaf1Q8BNE1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.41■■■□□ 2.14
Tcaf1Q8BNE1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Tcaf1Q8BNE1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Tcaf1Q8BNE1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Tcaf1Q8BNE1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
Tcaf1Q8BNE1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Tcaf1Q8BNE1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Tcaf1Q8BNE1 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.35■■■□□ 2.13
Tcaf1Q8BNE1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Tcaf1Q8BNE1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Tcaf1Q8BNE1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Tcaf1Q8BNE1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Tcaf1Q8BNE1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
Tcaf1Q8BNE1 Gm16148-201ENSMUST00000119653 893 ntBASIC28.29■■■□□ 2.12
Tcaf1Q8BNE1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Tcaf1Q8BNE1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Tcaf1Q8BNE1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
Tcaf1Q8BNE1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Tcaf1Q8BNE1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Tcaf1Q8BNE1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.23■■■□□ 2.11
Tcaf1Q8BNE1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Tcaf1Q8BNE1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Tcaf1Q8BNE1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Tcaf1Q8BNE1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Tcaf1Q8BNE1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Tcaf1Q8BNE1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Tcaf1Q8BNE1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Tcaf1Q8BNE1 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.13■■■□□ 2.09
Tcaf1Q8BNE1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Tcaf1Q8BNE1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28.13■■■□□ 2.09
Tcaf1Q8BNE1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Tcaf1Q8BNE1 Zfp131-205ENSMUST00000223812 663 ntBASIC28.12■■■□□ 2.09
Tcaf1Q8BNE1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Tcaf1Q8BNE1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Tcaf1Q8BNE1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
Tcaf1Q8BNE1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Tcaf1Q8BNE1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28.04■■■□□ 2.08
Tcaf1Q8BNE1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Tcaf1Q8BNE1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Tcaf1Q8BNE1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.03■■■□□ 2.08
Tcaf1Q8BNE1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.02■■■□□ 2.08
Tcaf1Q8BNE1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
Tcaf1Q8BNE1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
Tcaf1Q8BNE1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28■■■□□ 2.07
Tcaf1Q8BNE1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Tcaf1Q8BNE1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
Tcaf1Q8BNE1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Tcaf1Q8BNE1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27.97■■■□□ 2.07
Tcaf1Q8BNE1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Tcaf1Q8BNE1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.06
Tcaf1Q8BNE1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.93■■■□□ 2.06
Tcaf1Q8BNE1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
Tcaf1Q8BNE1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Tcaf1Q8BNE1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.92■■■□□ 2.06
Tcaf1Q8BNE1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Tcaf1Q8BNE1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.92■■■□□ 2.06
Tcaf1Q8BNE1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
Tcaf1Q8BNE1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Tcaf1Q8BNE1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.91■■■□□ 2.06
Tcaf1Q8BNE1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Tcaf1Q8BNE1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.91■■■□□ 2.06
Tcaf1Q8BNE1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.9■■■□□ 2.06
Tcaf1Q8BNE1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.9■■■□□ 2.06
Tcaf1Q8BNE1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Tcaf1Q8BNE1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Tcaf1Q8BNE1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Tcaf1Q8BNE1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Tcaf1Q8BNE1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Tcaf1Q8BNE1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.87■■■□□ 2.05
Tcaf1Q8BNE1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
Tcaf1Q8BNE1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Tcaf1Q8BNE1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms