Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Trpa1Q8BLA8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Trpa1Q8BLA8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Trpa1Q8BLA8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Trpa1Q8BLA8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Trpa1Q8BLA8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.26■■□□□ 1.95
Trpa1Q8BLA8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.25■■□□□ 1.95
Trpa1Q8BLA8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Trpa1Q8BLA8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Trpa1Q8BLA8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Trpa1Q8BLA8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
Trpa1Q8BLA8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.18■■□□□ 1.94
Trpa1Q8BLA8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Trpa1Q8BLA8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Trpa1Q8BLA8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Trpa1Q8BLA8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Trpa1Q8BLA8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
Trpa1Q8BLA8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Trpa1Q8BLA8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Trpa1Q8BLA8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Trpa1Q8BLA8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
Trpa1Q8BLA8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
Trpa1Q8BLA8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Trpa1Q8BLA8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.08■■□□□ 1.93
Trpa1Q8BLA8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.08■■□□□ 1.93
Trpa1Q8BLA8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Trpa1Q8BLA8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Trpa1Q8BLA8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Trpa1Q8BLA8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Trpa1Q8BLA8 Peli2-204ENSMUST00000226513 1320 ntBASIC27.01■■□□□ 1.91
Trpa1Q8BLA8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Trpa1Q8BLA8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Trpa1Q8BLA8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Trpa1Q8BLA8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
Trpa1Q8BLA8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Trpa1Q8BLA8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Trpa1Q8BLA8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Trpa1Q8BLA8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Trpa1Q8BLA8 Zxda-201ENSMUST00000117281 2621 ntBASIC26.96■■□□□ 1.91
Trpa1Q8BLA8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.94■■□□□ 1.9
Trpa1Q8BLA8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Trpa1Q8BLA8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
Trpa1Q8BLA8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trpa1Q8BLA8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Trpa1Q8BLA8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.89■■□□□ 1.9
Trpa1Q8BLA8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trpa1Q8BLA8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Trpa1Q8BLA8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Trpa1Q8BLA8 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.87■■□□□ 1.89
Trpa1Q8BLA8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Trpa1Q8BLA8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
Trpa1Q8BLA8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Trpa1Q8BLA8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Trpa1Q8BLA8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
Trpa1Q8BLA8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
Trpa1Q8BLA8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Trpa1Q8BLA8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Trpa1Q8BLA8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Trpa1Q8BLA8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Trpa1Q8BLA8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
Trpa1Q8BLA8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Trpa1Q8BLA8 Gm16148-201ENSMUST00000119653 893 ntBASIC26.75■■□□□ 1.87
Trpa1Q8BLA8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Trpa1Q8BLA8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Trpa1Q8BLA8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Trpa1Q8BLA8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Trpa1Q8BLA8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Trpa1Q8BLA8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Trpa1Q8BLA8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Trpa1Q8BLA8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
Trpa1Q8BLA8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
Trpa1Q8BLA8 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.66■■□□□ 1.86
Trpa1Q8BLA8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trpa1Q8BLA8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Trpa1Q8BLA8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.61■■□□□ 1.85
Trpa1Q8BLA8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Trpa1Q8BLA8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Trpa1Q8BLA8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Trpa1Q8BLA8 Zfp131-205ENSMUST00000223812 663 ntBASIC26.59■■□□□ 1.85
Trpa1Q8BLA8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Trpa1Q8BLA8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Trpa1Q8BLA8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trpa1Q8BLA8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trpa1Q8BLA8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Trpa1Q8BLA8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trpa1Q8BLA8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trpa1Q8BLA8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trpa1Q8BLA8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trpa1Q8BLA8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.53■■□□□ 1.84
Trpa1Q8BLA8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.53■■□□□ 1.84
Trpa1Q8BLA8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Trpa1Q8BLA8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Trpa1Q8BLA8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.51■■□□□ 1.83
Trpa1Q8BLA8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.51■■□□□ 1.83
Trpa1Q8BLA8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Trpa1Q8BLA8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.48■■□□□ 1.83
Trpa1Q8BLA8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trpa1Q8BLA8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Trpa1Q8BLA8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Trpa1Q8BLA8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.45■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms