Protein–RNA interactions for Protein: Q8BK63

Csnk1a1, Casein kinase I isoform alpha, mousemouse

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1a1Q8BK63 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.23■■□□□ 1.31
Csnk1a1Q8BK63 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.23■■□□□ 1.31
Csnk1a1Q8BK63 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Csnk1a1Q8BK63 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Csnk1a1Q8BK63 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Csnk1a1Q8BK63 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Csnk1a1Q8BK63 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Csnk1a1Q8BK63 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Csnk1a1Q8BK63 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Csnk1a1Q8BK63 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Csnk1a1Q8BK63 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.09■■□□□ 1.29
Csnk1a1Q8BK63 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
Csnk1a1Q8BK63 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Csnk1a1Q8BK63 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Csnk1a1Q8BK63 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Csnk1a1Q8BK63 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Csnk1a1Q8BK63 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Csnk1a1Q8BK63 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Csnk1a1Q8BK63 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Csnk1a1Q8BK63 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Csnk1a1Q8BK63 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Csnk1a1Q8BK63 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Csnk1a1Q8BK63 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Csnk1a1Q8BK63 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Csnk1a1Q8BK63 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Csnk1a1Q8BK63 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Csnk1a1Q8BK63 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Csnk1a1Q8BK63 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
Csnk1a1Q8BK63 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Csnk1a1Q8BK63 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Csnk1a1Q8BK63 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Csnk1a1Q8BK63 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Csnk1a1Q8BK63 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.92■■□□□ 1.26
Csnk1a1Q8BK63 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Csnk1a1Q8BK63 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Csnk1a1Q8BK63 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Csnk1a1Q8BK63 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Csnk1a1Q8BK63 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Csnk1a1Q8BK63 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Csnk1a1Q8BK63 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Csnk1a1Q8BK63 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Csnk1a1Q8BK63 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.86■■□□□ 1.25
Csnk1a1Q8BK63 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Csnk1a1Q8BK63 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Csnk1a1Q8BK63 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.84■■□□□ 1.25
Csnk1a1Q8BK63 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Csnk1a1Q8BK63 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Csnk1a1Q8BK63 Gm24804-201ENSMUST00000174982 85 ntBASIC22.82■■□□□ 1.24
Csnk1a1Q8BK63 Peli2-204ENSMUST00000226513 1320 ntBASIC22.8■■□□□ 1.24
Csnk1a1Q8BK63 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Csnk1a1Q8BK63 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Csnk1a1Q8BK63 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Csnk1a1Q8BK63 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Csnk1a1Q8BK63 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Csnk1a1Q8BK63 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Csnk1a1Q8BK63 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.75■■□□□ 1.23
Csnk1a1Q8BK63 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Csnk1a1Q8BK63 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Csnk1a1Q8BK63 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Csnk1a1Q8BK63 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Csnk1a1Q8BK63 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Csnk1a1Q8BK63 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Csnk1a1Q8BK63 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Csnk1a1Q8BK63 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Csnk1a1Q8BK63 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Csnk1a1Q8BK63 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Csnk1a1Q8BK63 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Csnk1a1Q8BK63 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.63■■□□□ 1.21
Csnk1a1Q8BK63 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Csnk1a1Q8BK63 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
Csnk1a1Q8BK63 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
Csnk1a1Q8BK63 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Csnk1a1Q8BK63 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Csnk1a1Q8BK63 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Csnk1a1Q8BK63 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Csnk1a1Q8BK63 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Csnk1a1Q8BK63 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Csnk1a1Q8BK63 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Csnk1a1Q8BK63 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.57■■□□□ 1.2
Csnk1a1Q8BK63 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Csnk1a1Q8BK63 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Csnk1a1Q8BK63 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Csnk1a1Q8BK63 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.56■■□□□ 1.2
Csnk1a1Q8BK63 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Csnk1a1Q8BK63 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Csnk1a1Q8BK63 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.56■■□□□ 1.2
Csnk1a1Q8BK63 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Csnk1a1Q8BK63 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.55■■□□□ 1.2
Csnk1a1Q8BK63 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Csnk1a1Q8BK63 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Csnk1a1Q8BK63 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Csnk1a1Q8BK63 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Csnk1a1Q8BK63 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.54■■□□□ 1.2
Csnk1a1Q8BK63 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.54■■□□□ 1.2
Csnk1a1Q8BK63 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Csnk1a1Q8BK63 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Csnk1a1Q8BK63 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Csnk1a1Q8BK63 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Csnk1a1Q8BK63 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Csnk1a1Q8BK63 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 215.2 ms