Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Chmp2bQ8BJF9 Mipep-204ENSMUST00000225043 1548 ntBASIC26.55■■□□□ 1.84
Chmp2bQ8BJF9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Chmp2bQ8BJF9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Chmp2bQ8BJF9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Chmp2bQ8BJF9 Gm25262-201ENSMUST00000174934 133 ntBASIC26.5■■□□□ 1.83
Chmp2bQ8BJF9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Chmp2bQ8BJF9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.49■■□□□ 1.83
Chmp2bQ8BJF9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Chmp2bQ8BJF9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Chmp2bQ8BJF9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Chmp2bQ8BJF9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Chmp2bQ8BJF9 Zxda-201ENSMUST00000117281 2621 ntBASIC26.44■■□□□ 1.82
Chmp2bQ8BJF9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Chmp2bQ8BJF9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Chmp2bQ8BJF9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Chmp2bQ8BJF9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.42■■□□□ 1.82
Chmp2bQ8BJF9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Chmp2bQ8BJF9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
Chmp2bQ8BJF9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.4■■□□□ 1.82
Chmp2bQ8BJF9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
Chmp2bQ8BJF9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Chmp2bQ8BJF9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Chmp2bQ8BJF9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Chmp2bQ8BJF9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Chmp2bQ8BJF9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Chmp2bQ8BJF9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Chmp2bQ8BJF9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Chmp2bQ8BJF9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Chmp2bQ8BJF9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Chmp2bQ8BJF9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Chmp2bQ8BJF9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Chmp2bQ8BJF9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Chmp2bQ8BJF9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Chmp2bQ8BJF9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.19■■□□□ 1.78
Chmp2bQ8BJF9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Chmp2bQ8BJF9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.18■■□□□ 1.78
Chmp2bQ8BJF9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Chmp2bQ8BJF9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Chmp2bQ8BJF9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.16■■□□□ 1.78
Chmp2bQ8BJF9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Chmp2bQ8BJF9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Chmp2bQ8BJF9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Chmp2bQ8BJF9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Chmp2bQ8BJF9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Chmp2bQ8BJF9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
Chmp2bQ8BJF9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Chmp2bQ8BJF9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Chmp2bQ8BJF9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.11■■□□□ 1.77
Chmp2bQ8BJF9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.11■■□□□ 1.77
Chmp2bQ8BJF9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Chmp2bQ8BJF9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Chmp2bQ8BJF9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
Chmp2bQ8BJF9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Chmp2bQ8BJF9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Chmp2bQ8BJF9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.76
Chmp2bQ8BJF9 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.06■■□□□ 1.76
Chmp2bQ8BJF9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Chmp2bQ8BJF9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Chmp2bQ8BJF9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Chmp2bQ8BJF9 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.05■■□□□ 1.76
Chmp2bQ8BJF9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Chmp2bQ8BJF9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.05■■□□□ 1.76
Chmp2bQ8BJF9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Chmp2bQ8BJF9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.03■■□□□ 1.76
Chmp2bQ8BJF9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Chmp2bQ8BJF9 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.02■■□□□ 1.76
Chmp2bQ8BJF9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
Chmp2bQ8BJF9 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.01■■□□□ 1.75
Chmp2bQ8BJF9 Gm27322-201ENSMUST00000184007 104 ntBASIC25.99■■□□□ 1.75
Chmp2bQ8BJF9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
Chmp2bQ8BJF9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Chmp2bQ8BJF9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Chmp2bQ8BJF9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Chmp2bQ8BJF9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.96■■□□□ 1.75
Chmp2bQ8BJF9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
Chmp2bQ8BJF9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Chmp2bQ8BJF9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Chmp2bQ8BJF9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Chmp2bQ8BJF9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
Chmp2bQ8BJF9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Chmp2bQ8BJF9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
Chmp2bQ8BJF9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
Chmp2bQ8BJF9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Chmp2bQ8BJF9 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.87■■□□□ 1.73
Chmp2bQ8BJF9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.86■■□□□ 1.73
Chmp2bQ8BJF9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Chmp2bQ8BJF9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Chmp2bQ8BJF9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Chmp2bQ8BJF9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Chmp2bQ8BJF9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Chmp2bQ8BJF9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Chmp2bQ8BJF9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Chmp2bQ8BJF9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Chmp2bQ8BJF9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Chmp2bQ8BJF9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Chmp2bQ8BJF9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Chmp2bQ8BJF9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
Chmp2bQ8BJF9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Chmp2bQ8BJF9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms