Protein–RNA interactions for Protein: Q8BH47

Sec22a, Vesicle-trafficking protein SEC22a, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec22aQ8BH47 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Sec22aQ8BH47 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sec22aQ8BH47 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sec22aQ8BH47 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sec22aQ8BH47 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Sec22aQ8BH47 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.03■■□□□ 1.12
Sec22aQ8BH47 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.03■■□□□ 1.12
Sec22aQ8BH47 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sec22aQ8BH47 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Sec22aQ8BH47 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Sec22aQ8BH47 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sec22aQ8BH47 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Sec22aQ8BH47 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22■■□□□ 1.11
Sec22aQ8BH47 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Sec22aQ8BH47 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sec22aQ8BH47 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sec22aQ8BH47 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sec22aQ8BH47 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sec22aQ8BH47 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sec22aQ8BH47 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.95■■□□□ 1.1
Sec22aQ8BH47 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sec22aQ8BH47 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sec22aQ8BH47 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sec22aQ8BH47 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sec22aQ8BH47 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Sec22aQ8BH47 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sec22aQ8BH47 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sec22aQ8BH47 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sec22aQ8BH47 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sec22aQ8BH47 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Sec22aQ8BH47 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sec22aQ8BH47 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sec22aQ8BH47 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sec22aQ8BH47 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sec22aQ8BH47 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.86■■□□□ 1.09
Sec22aQ8BH47 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sec22aQ8BH47 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Sec22aQ8BH47 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sec22aQ8BH47 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sec22aQ8BH47 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sec22aQ8BH47 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sec22aQ8BH47 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sec22aQ8BH47 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sec22aQ8BH47 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Sec22aQ8BH47 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sec22aQ8BH47 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Sec22aQ8BH47 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Sec22aQ8BH47 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Sec22aQ8BH47 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sec22aQ8BH47 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sec22aQ8BH47 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sec22aQ8BH47 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
Sec22aQ8BH47 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.76■■□□□ 1.07
Sec22aQ8BH47 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
Sec22aQ8BH47 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Sec22aQ8BH47 Mipep-204ENSMUST00000225043 1548 ntBASIC21.72■■□□□ 1.07
Sec22aQ8BH47 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sec22aQ8BH47 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sec22aQ8BH47 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sec22aQ8BH47 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Sec22aQ8BH47 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sec22aQ8BH47 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Sec22aQ8BH47 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sec22aQ8BH47 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.67■■□□□ 1.06
Sec22aQ8BH47 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sec22aQ8BH47 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sec22aQ8BH47 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sec22aQ8BH47 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sec22aQ8BH47 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sec22aQ8BH47 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.65■■□□□ 1.06
Sec22aQ8BH47 Gm25262-201ENSMUST00000174934 133 ntBASIC21.64■■□□□ 1.05
Sec22aQ8BH47 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sec22aQ8BH47 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sec22aQ8BH47 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Sec22aQ8BH47 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sec22aQ8BH47 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sec22aQ8BH47 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sec22aQ8BH47 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Sec22aQ8BH47 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sec22aQ8BH47 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sec22aQ8BH47 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sec22aQ8BH47 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sec22aQ8BH47 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sec22aQ8BH47 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Sec22aQ8BH47 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sec22aQ8BH47 Amer2-203ENSMUST00000225247 2662 ntBASIC21.55■■□□□ 1.04
Sec22aQ8BH47 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sec22aQ8BH47 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sec22aQ8BH47 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sec22aQ8BH47 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sec22aQ8BH47 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sec22aQ8BH47 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Sec22aQ8BH47 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Sec22aQ8BH47 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sec22aQ8BH47 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Sec22aQ8BH47 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Sec22aQ8BH47 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
Sec22aQ8BH47 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Sec22aQ8BH47 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Sec22aQ8BH47 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 151.6 ms